Pre_GI: BLASTP Hits

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Query: NC_002944:99000:104739 Mycobacterium avium subsp. paratuberculosis K-10, complete genome

Start: 104739, End: 105512, Length: 774

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a diary herd in Wisconsin, USA in the 1970's. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008596:3404832:340867134086713409429759Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, TetR family protein3e-108391
NC_013757:21245:245362453625210675Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, TetR family1e-24113
NC_015434:2683631:270247427024742703091618Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator6e-24111
NC_008526:74500:104011104011104658648Lactobacillus casei ATCC 334, complete genomeTranscriptional regulator2e-1892.4
NC_014221:1518583:152696715269671527650684Truepera radiovictrix DSM 17093 chromosome, complete genometranscriptional regulator, TetR family1e-1790.1
NC_019673:8161242:816215981621598162875717Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, TetR family1e-1480.1
NC_015953:2603526:261081926108192611727909Streptomyces sp. SirexAA-E chromosome, complete genomeGntR family transcriptional regulator6e-1477.8
NC_013929:5850599:586537458653745866114741Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator1e-1273.9
NC_009921:4948500:497210549721054972827723Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family1e-1273.6
NC_013131:4473410:449156644915664492117552Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, TetR family8e-1270.9
NC_016111:986936:100046210004621001124663Streptomyces cattleya NRRL 8057, complete genomeTetR-family transcriptional regulator1e-1170.5
NC_009838:81913:908869088691545660Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequencehypothetical protein2e-1170.1
NC_013757:3717500:373045537304553731231777Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, TetR family4e-1168.6
NC_007777:2543475:255182225518222552403582Frankia sp. CcI3, complete genometranscriptional regulator, TetR family7e-1167.8
NC_003155:622993:634378634378635061684Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator7e-1167.8
NC_013595:41245:412454124541949705Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family6e-1167.8
NC_014391:1317957:132412413241241324828705Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeregulatory protein TetR1e-1067
NC_003888:4750489:477221547722154773021807Streptomyces coelicolor A3(2), complete genometetR family transcriptional regulatory protein1e-1067
NC_017904:1831071:183107118310711831727657Mycobacterium sp. MOTT36Y chromosome, complete genomeregulatory protein TetR1e-1066.6
NC_010676:2658495:268410526841052684884780Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, TetR family3e-1065.5
NC_020418:448687:458161458161458784624Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-0963.9
NC_015656:2565417:258060425806042581263660Frankia symbiont of Datisca glomerata chromosome, complete genomeregulatory protein TetR1e-0963.9
NC_008595:5168941:520266052026605203292633Mycobacterium avium 104, complete genometranscriptional regulator, TetR family protein1e-0963.5
NC_016860:4055117:406437340643734064996624Salmonella enterica subsp. enterica serovar Typhimurium strtetracycline repressor protein TetR1e-0963.5
NC_011749:34056:448344483445460627Escherichia coli UMN026 plasmid p1ESCUM, complete sequenceTetR family transcriptional regulator1e-0963.5
CU928145:4950723:497335049733504973976627Escherichia coli 55989 chromosome, complete genomeTetracycline repressor protein class B from transposon Tn101e-0963.5
NC_011748:4950723:497335049733504973976627Escherichia coli 55989, complete genometetracycline repressor protein TetR1e-0963.5
NC_010939:405477:417091417091417717627Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTetracycline repressor protein class B from transposon Tn101e-0963.5
NC_003384:157158:179219179219179845627Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidtetracycline repressor protein1e-0963.5
NC_013365:92973:959939599396619627Escherichia coli O111:H- str. 11128 plasmid pO111_1, completeTetR family transcriptional regulator1e-0963.5
NC_017171:280762:286950286950287576627Acinetobacter baumannii MDR-ZJ06 chromosome, complete genometetracycline repressor protein TetR1e-0963.5
NC_017328:1075535:110734211073421107968627Shigella flexneri 2002017 chromosome, complete genomeTetracycline repressor protein class B from transposon Tn101e-0963.5
NC_017328:1075535:111874711187471119373627Shigella flexneri 2002017 chromosome, complete genomeTetracycline repressor protein class B from transposon Tn101e-0963.5
NC_017387:247462:288973288973289599627Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometetracycline repressor protein class G1e-0963.5
NC_014815:6576983:658020065802006580892693Micromonospora sp. L5 chromosome, complete genomeregulatory protein tetr4e-0962
NC_013729:666406:666406666406667086681Kribbella flavida DSM 17836, complete genometranscriptional regulator, TetR family5e-0961.6
NC_012668:3037345:304768430476843048361678Vibrio cholerae MJ-1236 chromosome 1, complete sequencetetracycline repressor2e-0859.7
NC_011586:268927:291388291388292065678Acinetobacter baumannii AB0057 chromosome, complete genometetracycline repressor protein, class A2e-0859.7
NC_010410:3606826:364313736431373643814678Acinetobacter baumannii AYE, complete genometetracycline repressor protein2e-0859.7
NC_009349:3396:339633964028633Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completetetracycline repressor protein TetR(E)2e-0859.3
NC_010519:1963256:197888119788811979504624Haemophilus somnus 2336 chromosome, complete genomeTetR family transcriptional regulator5e-0858.5
NC_010410:3606826:367271136727113673337627Acinetobacter baumannii AYE, complete genomeTetracycline repressor protein class G6e-0858.2
NC_015671:3093596:309531530953153096085771Cellvibrio gilvus ATCC 13127 chromosome, complete genomeregulatory protein TetR8e-0857.8
NC_014666:4419693:442814444281444428806663Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR7e-0857.8
NC_013947:6678000:668328666832866683963678Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family8e-0857.4
NC_016109:327826:332145332145332954810Kitasatospora setae KM-6054, complete genomeputative TetR family transcriptional regulator9e-0857.4
NC_009921:3419978:343335534333553434005651Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family1e-0757.4
NC_010162:9311465:931658793165879317582996Sorangium cellulosum 'So ce 56', complete genomeputative transcriptional regulator1e-0757
NC_008268:442657:443606443606444277672Rhodococcus sp. RHA1, complete genomeprobable tetracycline repressor protein4e-0755.1
NC_014638:183115:204197204197204832636Bifidobacterium bifidum PRL2010 chromosome, complete genometetR family transcriptional regulator7e-0754.7
NC_012803:1094679:111035611103561111048693Micrococcus luteus NCTC 2665, complete genometranscriptional regulator, tetR family7e-0754.7
NC_014169:231210:234074234074234709636Bifidobacterium longum subsp. longum JDM301 chromosome, completeTetR-type transcriptional regulator7e-0754.3
NC_009664:1434974:145201714520171452733717Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family8e-0754.3
NC_013947:1537275:154742115474211548170750Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family8e-0754.3
NC_016109:6816000:683519868351986835905708Kitasatospora setae KM-6054, complete genomeputative TetR family transcriptional regulator1e-0653.9
NC_003155:921494:925541925541926167627Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator1e-0653.5
NC_013595:3541012:355596035559603556841882Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, GntR family4e-0652
NC_008268:442657:456425456425457084660Rhodococcus sp. RHA1, complete genomeprobable tetracycline repressor protein5e-0651.6