Pre_GI: BLASTP Hits

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Query: NC_002944:1881405:1897902 Mycobacterium avium subsp. paratuberculosis K-10, complete genome

Start: 1897902, End: 1898510, Length: 609

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a diary herd in Wisconsin, USA in the 1970's. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017904:2641270:264490426449042645512609Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein2e-107388
NC_021177:2034722:203742520374252038024600Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator8e-1580.1
NC_013093:2547608:256281725628172563404588Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, TetR family3e-1375.1
NC_006958:359760:400499400499401152654Corynebacterium glutamicum ATCC 13032, complete genomeTETR-FAMILY TRANSCRIPTIONAL REGULATOR4e-1374.7
NC_016114:7282882:728438972843897285000612Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeregulatory protein TetR2e-1272.4
NC_013947:6221877:622483562248356225428594Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family9e-1270.1
NC_003450:359759:400545400545401153609Corynebacterium glutamicum ATCC 13032, complete genometranscriptional regulator3e-1168.2
NC_015957:8569721:858773485877348588399666Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR4e-1167.8
NC_015588:95697:101094101094101801708Isoptericola variabilis 225 chromosome, complete genomeregulatory protein TetR1e-1066.2
NC_021177:2185898:220127722012772201948672Streptomyces fulvissimus DSM 40593, complete genomeTetR-family transcriptional regulator1e-1066.2
NC_009142:3943829:394740439474043948024621Saccharopolyspora erythraea NRRL 2338, complete genomeTetR-family transcriptional regulator2e-1065.5
NC_018581:1718023:172232617223261722994669Gordonia sp. KTR9 chromosome, complete genomeTranscriptional regulator3e-1065.1
NC_017904:5543490:555776555577655558370606Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator3e-0961.6
NC_008595:2687245:269486726948672695457591Mycobacterium avium 104, complete genometranscriptional regulator1e-0859.7
NC_016582:4983222:499773149977314998288558Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator3e-0858.5
NC_015953:6212366:623034562303456231064720Streptomyces sp. SirexAA-E chromosome, complete genomeTetR family transcriptional regulator4e-0857.8
NC_010338:588000:599423599423600112690Caulobacter sp. K31, complete genometranscriptional regulator, TetR family6e-0857.4
NC_016948:2931285:296748729674872968077591Mycobacterium intracellulare MOTT-64 chromosome, complete genometranscriptional regulator6e-0857.4
NC_017955:3731480:373647937364793737048570Modestobacter marinus, complete genomeTetR family transcriptional regulator1e-0756.6
NC_016582:10287865:102978051029780510298467663Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator1e-0756.6
NC_013521:1619394:163963316396331640235603Sanguibacter keddieii DSM 10542, complete genometranscriptional regulator, tetR family1e-0756.2
NC_012522:7763426:777316977731697773822654Rhodococcus opacus B4, complete genomeputative TetR family transcriptional regulator3e-0755.1
NC_007412:110698:121997121997122653657Anabaena variabilis ATCC 29413 plasmid C, complete sequenceTranscriptional Regulator, TetR family3e-0755.1
NC_007645:2294553:231984623198462320478633Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator4e-0754.7
NC_015953:46732:673036730367899597Streptomyces sp. SirexAA-E chromosome, complete genomeTetR family transcriptional regulator4e-0754.7
NC_018581:1718023:172428917242891724921633Gordonia sp. KTR9 chromosome, complete genomeTranscriptional regulator7e-0753.9
NC_013592:3212834:322461232246123225190579Dickeya dadantii Ech586, complete genometranscriptional regulator, TetR family7e-0753.9
NC_003888:4377000:438203043820304382620591Streptomyces coelicolor A3(2), complete genomeTetR-family transcriptional regulator1e-0653.1
NC_014218:1163513:116800911680091168629621Arcanobacterium haemolyticum DSM 20595 chromosome, complete genometranscriptional regulator, TetR family1e-0653.1
NC_013929:7117326:711959371195937120255663Streptomyces scabiei 87.22 chromosome, complete genometranscriptional regulator1e-0653.1
NC_011830:4473583:449130044913004491902603Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, TetR family3e-0652
NC_010397:235976:251072251072251665594Mycobacterium abscessus chromosome Chromosome, complete sequencePutative regulatory protein, TetR family2e-0652
NC_015957:7301546:730894073089407309644705Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR2e-0652
NC_016582:10227196:102575981025759810258293696Streptomyces bingchenggensis BCW-1 chromosome, complete genometranscriptional regulator2e-0652
NC_007907:3472494:347712934771293477731603Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0652
NC_015656:3300747:330382733038273304501675Frankia symbiont of Datisca glomerata chromosome, complete genomeregulatory protein TetR4e-0651.2
NC_018531:1991218:200816120081612008754594Arthrobacter sp. Rue61a chromosome, complete genomeregulatory protein TetR6e-0650.8
NC_015312:5579078:559739255973925598159768Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeregulatory protein TetR6e-0650.8
NC_014152:927969:945497945497946150654Thermincola sp. JR, complete genometranscriptional regulator, TetR family7e-0650.4
NC_010511:7024412:702935870293587030014657Methylobacterium sp. 4-46 chromosome, complete genomeTetR family transcriptional regulator8e-0650.4