Pre_GI: BLASTP Hits

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Query: NC_002942:1109618:1125522 Legionella pneumophila subsp. pneumophila str. Philadelphia 1,

Start: 1125522, End: 1126859, Length: 1338

Host Lineage: Legionella pneumophila; Legionella; Legionellaceae; Legionellales; Proteobacteria; Bacteria

General Information: This strain is the isolate from the initial event of Legionellosis in Philadelphia, USA. Causes Legionnaire's disease. This organism is a non-marine bacterium usually found growing inside other organisms such as protozoans in aquatic environments. They can also be found in soil, freshwater, and in biofilms. The cause of the disease was traced to Legionella bacteria. Once the bacteria are brought into the lungs they make contact with alveolar macrophages and are internalized where they can cause severe respiratory distress. Internalization occurs through specialized vacuoles (replicative phagosomes) that allow the bacteria to grow and replicate prior to escape from the macrophage. Formation of the replicative phagosome, which requires reprogramming of the normal phagosome maturation pathway, requires a type IV secretion system called the Dot/Icm system. This type IV system is closely related to the conjugative system of plasmid ColIb-P9, and is involved in the secretion of numerous protein components that aid in formation of the replicative phagosome. Other virulence determinants include a set of multidrug transporters and other efflux pumps for toxic compounds that may allow the organism to persist in its habitat, a set of LPS phase variable genes that enhance immune evasion, and a type II secretion system for transport of hydrolases.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006368:2684358:2695359269535926966721314Legionella pneumophila str. Paris, complete genomeChemiosmotic efflux system C protein C0832
NC_011146:2200142:2240273224027322415711299Geobacter bemidjiensis Bem, complete genomeouter membrane efflux protein6e-24112
NC_002939:2337402:2354577235457723558901314Geobacter sulfurreducens PCA, complete genomemetal ion efflux outer membrane protein family protein, putative8e-24112
NC_002939:2315402:2354577235457723558901314Geobacter sulfurreducens PCA, complete genomemetal ion efflux outer membrane protein family protein, putative8e-24112
NC_009439:1297851:1323417132341713246671251Pseudomonas mendocina ymp, complete genomeouter membrane efflux protein9e-1788.6
NC_010322:29983:6347663476647471272Pseudomonas putida GB-1 chromosome, complete genomeouter membrane efflux protein5e-1582.8
NC_010501:30000:6741067410686811272Pseudomonas putida W619, complete genomeouter membrane efflux protein5e-1582.8
NC_002947:8394:5071850718519891272Pseudomonas putida KT2440, complete genomecobalt/zinc/cadmium efflux RND transporter, outer membrane protein, CzcC family5e-1582.8
NC_009512:27783:6269462694638781185Pseudomonas putida F1, complete genomeouter membrane efflux protein4e-1479.7
NC_017986:2548720:2596893259689325980771185Pseudomonas putida ND6 chromosome, complete genomeouter membrane efflux protein1e-1378.6
NC_014910:242845:2515782515782529031326Alicycliphilus denitrificans BC chromosome, complete genomeouter membrane efflux protein2e-1274.3
NC_015740:1291739:1303598130359813048391242Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completecobalt-zinc-cadmium resistance protein CzcC2e-1170.9
NC_008782:1917634:1928110192811019294651356Acidovorax sp. JS42, complete genomeouter membrane efflux protein6e-1168.9
NC_009434:3611738:3697189369718936984301242Pseudomonas stutzeri A1501, complete genomecobalt-zinc-cadmium resistance protein CzcC, putative1e-1068.6
NC_015733:5909821:594451559445155945135621Pseudomonas putida S16 chromosome, complete genomeCzcC family cobalt/zinc/cadmium efflux transporter outer membrane protein1e-0964.7
NC_009138:1583988:1587664158766415889621299Herminiimonas arsenicoxydans, complete genomeCobalt-zinc-cadmium resistance protein czcC precursor (Cation efflux system protein czcC)2e-0963.9
NC_003296:612000:6124006124006137251326Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE COBALT-ZINC-CADMIUM OUTER MEMBRANE RESISTANCE PROTEIN3e-0963.5
NC_009138:519965:5232805232805245691290Herminiimonas arsenicoxydans, complete genomedivalent cation efflux system periplasmic protein CzcC3e-0963.5
NC_014323:5051041:5070673507067350719591287Herbaspirillum seropedicae SmR1 chromosome, complete genomecobalt-zinc-cadmium resistance cation efflux system outer membrane protein4e-0963.2
NC_008607:11663:2176721767231071341Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequenceouter membrane efflux protein2e-0860.8
NC_009659:1984980:2003846200384620051351290Janthinobacterium sp. Marseille chromosome, complete genomecobalt-zinc-cadmium outer membrane resistance protein czcC6e-0859.3
NC_010002:1879220:1906105190610519074361332Delftia acidovorans SPH-1, complete genomeouter membrane efflux protein2e-0757.8
NC_018697:1343756:1359083135908313602911209Cycloclasticus sp. P1 chromosome, complete genomeOuter membrane efflux protein2e-0757.8
NC_012968:1594954:1626466162646616277311266Methylotenera mobilis JLW8, complete genomeouter membrane efflux protein3e-0757
NC_010170:4800000:4868326486832648696151290Bordetella petrii, complete genomemetal ion efflux outer membrane protein, putative4e-0756.6
NC_013446:2820000:2835724283572428370011278Comamonas testosteroni CNB-2, complete genomeouter membrane efflux protein3e-0756.6
NC_007951:1711223:1732757173275717343071551Burkholderia xenovorans LB400 chromosome 1, complete sequenceRND efflux system, outer membrane lipoprotein, NodT family5e-0756.2
NC_020126:2299150:2303598230359823049141317Myxococcus stipitatus DSM 14675, complete genomeouter membrane efflux protein2e-0654.3
NC_008752:2724977:2740441274044127417511311Acidovorax avenae subsp. citrulli AAC00-1, complete genomeouter membrane efflux protein3e-0653.5
NC_002977:2254440:2269135226913522704481314Methylococcus capsulatus str. Bath, complete genomeouter membrane efflux protein4e-0653.1
NC_013894:1194458:1216513121651312177121200Thermocrinis albus DSM 14484 chromosome, complete genomeouter membrane efflux protein8e-0652
NC_016609:5890292:5935933593593359372131281Niastella koreensis GR20-10 chromosome, complete genomeouter membrane efflux protein9e-0652