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Query: NC_002940:1234410 Haemophilus ducreyi 35000HP, complete genome

Start: 1234410, End: 1258029, Length: 23620

Host Lineage: Haemophilus ducreyi; Haemophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: This strain is a human passage derivative of Haemophilus ducreyi strain 35000 that is serum-resistant. Causative agent of chancroid. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism is an obligate human pathogen that causes the sexually transmitted disease chancroid (ulcer of the genital region) and it enhances the transmission of HIV (which enhances Haemophilus ducreyi transmission in turn). This organism is an apparent extracellular pathogen that resists phagocytosis. Some of the virulence factors include an outer membrane serum resistance protein, as well as two toxins, cytolethal distending toxin (CDT) and hemolysin, both of which contribute to tissue destruction.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002940:919175*91917594297523801Haemophilus ducreyi 35000HP, complete genome012260BLASTN svgBLASTP svg
NC_015964:1389628*1389628140919019563Haemophilus parainfluenzae T3T1, complete genome4e-144519BLASTN svgBLASTP svg
NC_013416:1091432*1091432110961418183Aggregatibacter actinomycetemcomitans D11S-1, complete genome2e-35159BLASTN svgBLASTP svg
NC_012913:20741262074126209384819723Aggregatibacter aphrophilus NJ8700, complete genome9e-31143BLASTN svgBLASTP svg
NC_013456:30115183011518303472823211Vibrio sp. Ex25 chromosome 1, complete genome8e-22113BLASTN svgBLASTP svg
NC_005126:32049803204980322748422505Photorhabdus luminescens subsp. laumondii TTO1, complete genome3e-21111BLASTN svgBLASTP svg
NC_006370:84720484720486812520922Photobacterium profundum SS9 chromosome 1, complete sequence1e-1799.6BLASTN svgBLASTP svg
NC_012214:12126161212616123625023635Erwinia pyrifoliae Ep1/96, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_012917:33787593378759339704718289Pectobacterium carotovorum subsp. carotovorum PC1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012912:12956531295653131862422972Dickeya zeae Ech1591, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_020063:11940001194000121676222763Enterobacteriaceae bacterium strain FGI 57, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_012913:2189862*2189862221535925498Aggregatibacter aphrophilus NJ8700, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009800:26517302651730267629124562Escherichia coli HS, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_007712:29780002978000300020322204Sodalis glossinidius str. 'morsitans', complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010634:32508103250810326864117832Yersinia pseudotuberculosis PB1/+, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_006155:33333033333303335118117879Yersinia pseudotuberculosis IP 32953, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_002663:62500625008653124032Pasteurella multocida subsp. multocida str. Pm70, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_018697:61883261883264338524554Cycloclasticus sp. P1 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013956:31814213181421320344322023Pantoea ananatis LMG 20103 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_004347:34373693437369345870921341Shewanella oneidensis MR-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_020064:35175003517500354133523836Serratia marcescens FGI94, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014500:35197223519722353859918878Dickeya dadantii 3937 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_006905:26300002630000265438924390Salmonella enterica subsp. enterica serovar Choleraesuis str5e-0867.9BLASTN svgBLASTP svg
NC_004741:25930122593012261557622565Shigella flexneri 2a str. 2457T, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013282:3216226*3216226324341527190Cronobacter turicensis, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012779:30163273016327304089024564Edwardsiella ictaluri 93-146, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010465:14271701427170145224325074Yersinia pseudotuberculosis YPIII, complete genome7e-0763.9BLASTN svgBLASTP svg