Pre_GI: BLASTP Hits

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Query: NC_002937:1915787:1925817 Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete

Start: 1925817, End: 1926353, Length: 537

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: This strain was isolated from clay soil near Hildenborough, UK in 1946. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008751:1043269:108077710807771081310534Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeputative cold-shock DNA-binding domain protein1e-58225
NC_006513:1695487:170804017080401708609570Azoarcus sp. EbN1, complete genomeprobable cold shock family protein4e-24110
NC_004459:2443000:257510025751002575567468Vibrio vulnificus CMCP6 chromosome I, complete sequenceCold shock domain family protein5e-23107
NC_004603:1897532:190226619022661902760495Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein4e-2097.4
NC_004347:718091:748237748237748848612Shewanella oneidensis MR-1, complete genomecold shock domain family protein3e-1994.7
NC_007948:3541987:355141135514113551992582Polaromonas sp. JS666, complete genomecold-shock DNA-binding domain protein3e-1994.4
NC_010506:5195000:520433252043325204952621Shewanella woodyi ATCC 51908, complete genomecold-shock DNA-binding domain protein2e-1891.7
NC_012108:2542328:255697125569712557495525Desulfobacterium autotrophicum HRM2, complete genomeputative cold shock domain family protein3e-1787.8
NC_006138:225832:252701252701253288588Desulfotalea psychrophila LSv54, complete genomehypothetical protein5e-1787
NC_013194:4034854:403871240387124039014303Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completecold-shock DNA-binding protein family4e-1374.3
NC_009092:521519:542808542808543425618Shewanella loihica PV-4, complete genomecold-shock DNA-binding domain protein7e-1373.2
NC_009439:1174432:117984611798461180316471Pseudomonas mendocina ymp, complete genomehypothetical protein1e-1272.4
NC_017075:2293209:230344023034402303844405Rubrivivax gelatinosus IL144, complete genomehypothetical protein1e-1169.3
NC_013173:2884887:289990228999022900072171Desulfomicrobium baculatum DSM 4028, complete genome1e-1169.3
NC_016147:151224:167376167376167663288Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecold-shock DNA-binding protein family2e-1168.6
NC_006138:2341975:234197523419752342589615Desulfotalea psychrophila LSv54, complete genomehypothetical protein5e-0960.8
NC_015856:1733500:175381917538191754436618Collimonas fungivorans Ter331 chromosome, complete genomecold-shock DNA-binding domain-containing protein1e-0652.8
NC_011595:3015895:302083630208363021183348Acinetobacter baumannii AB307-0294, complete genomehypothetical protein2e-0652
NC_009085:893601:909395909395909742348Acinetobacter baumannii ATCC 17978, complete genomeExcalibur2e-0652
NC_012559:854507:866611866611866865255Laribacter hongkongensis HLHK9, complete genomeProphage MuMc02, nuclease, putative3e-0651.2