Pre_GI: BLASTP Hits

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Query: NC_002937:1548081:1560130 Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete

Start: 1560130, End: 1560939, Length: 810

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: This strain was isolated from clay soil near Hildenborough, UK in 1946. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008751:2988235:300617030061703006868699Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomenuclease (SNase domain protein)3e-29129
NC_012796:4693500:472231247223124722971660Desulfovibrio magneticus RS-1, complete genomeputative nuclease4e-28125
NC_014972:210500:217951217951218613663Desulfobulbus propionicus DSM 2032 chromosome, complete genomenuclease3e-25115
NC_002937:2068117:208797820879782088394417Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completenuclease, putative1e-21103
NC_009715:1829978:186455318645531864999447Campylobacter curvus 525.92 chromosome, complete genomeATP-dependent hsl protease ATP-binding subunit HslU1e-20100
NC_012918:2758775:279392827939282794467540Geobacter sp. M21 chromosome, complete genomenuclease1e-1893.6
NC_011749:34056:535635356354099537Escherichia coli UMN026 plasmid p1ESCUM, complete sequencenuclease5e-1891.7
NC_007608:97092:110172110172110633462Shigella boydii Sb227 plasmid pSB4_227, complete sequencehypothetical protein1e-1790.1
NC_012918:2758775:280401928040192804495477Geobacter sp. M21 chromosome, complete genomenuclease3e-1789
NC_014733:2095996:211619221161922116746555Methylovorus sp. MP688 chromosome, complete genomenuclease (snase domain protein)3e-1789
NC_012969:2136243:221955522195552220109555Methylovorus glucosetrophus SIP3-4 chromosome, complete genomenuclease6e-1787.8
NC_008786:4070753:407453540745354074996462Verminephrobacter eiseniae EF01-2, complete genomenuclease (SNase domain protein)2e-1686.3
NC_007604:2213659:222852922285292229017489Synechococcus elongatus PCC 7942, complete genomenuclease (SNase-like)1e-1583.6
NC_011667:1:391239124400489Thauera sp. MZ1T plasmid pTha01, complete sequencenuclease (SNase domain protein)2e-1583.2
NC_010660:175200:190143190143190643501Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence4e-1582
NC_006576:2073163:208801320880132088501489Synechococcus elongatus PCC 6301, complete genomehypothetical protein6e-1581.3
NC_009927:253250:253250253250253777528Acaryochloris marina MBIC11017 plasmid pREB2, complete sequencestaphylococcus nuclease, putative9e-1580.9
NC_016616:760145:768659768659769195537Dechlorosoma suillum PS chromosome, complete genomemicrococcal nuclease-like nuclease1e-1480.5
NC_016616:2112211:211854521185452119039495Dechlorosoma suillum PS chromosome, complete genomemicrococcal nuclease-like nuclease7e-1477.8
NC_013222:615948:631046631046631489444Robiginitalea biformata HTCC2501, complete genomepredicted micrococcal nuclease-like protein3e-1375.9
NC_009481:1927995:193761319376131938212600Synechococcus sp. WH 7803 chromosome, complete genomenuclease-like protein3e-1375.9
NC_007517:3430237:344916434491643449706543Geobacter metallireducens GS-15, complete genomeSNase-like nuclease4e-1375.5
NC_009481:845500:853538853538854140603Synechococcus sp. WH 7803 chromosome, complete genomenuclease-like protein1e-1273.9
NC_014931:2949697:295952229595222960094573Variovorax paradoxus EPS chromosome, complete genomenuclease (SNase domain-containing protein)1e-1170.5
NC_005071:288922:339767339767340351585Prochlorococcus marinus str. MIT 9313, complete genomeStaphylococcus nuclease (SNase) homologues1e-1170.1
NC_012988:4262631:426263142626314263314684Methylobacterium extorquens DM4, complete genomenuclease3e-1169.3
NC_021150:5234000:523859652385965239153558Azotobacter vinelandii CA6, complete genomenuclease4e-1168.6
NC_012560:5276000:528070452807045281261558Azotobacter vinelandii DJ, complete genomeStaphylococcus nuclease (SNase-like)4e-1168.6
NC_005070:334952:343315343315343929615Synechococcus sp. WH 8102, complete genomeStaphylococcal nuclease homologue1e-1067.4
NC_011757:276953:295697295697296380684Methylobacterium chloromethanicum CM4, complete genomenuclease (SNase domain protein)1e-1067
NC_004342:3668371:367555836755583676535978Leptospira interrogans serovar Lai str. 56601 chromosome I,Staphylococcal nuclease family protein2e-1066.2
NC_005823:569594:601854601854602831978Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130nuclease-like protein2e-1066.2
NC_014910:1708045:172307217230721723551480Alicycliphilus denitrificans BC chromosome, complete genomenuclease (snase domain-containing protein)3e-1065.9
NC_012791:4794362:481144748114474811986540Variovorax paradoxus S110 chromosome 1, complete genomenuclease (SNase domain protein)9e-1064.3
NC_013132:782846:798974798974799489516Chitinophaga pinensis DSM 2588, complete genomenuclease (SNase domain protein)8e-1064.3
NC_013416:1588369:159322915932291593729501Aggregatibacter actinomycetemcomitans D11S-1, complete genomeprotein ParB8e-1064.3
NC_016513:1924242:192915919291591929659501Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeprotein ParB8e-1064.3
NC_018000:4958637:496937049693704970026657Sinorhizobium fredii USDA 257 chromosome, complete genomenuclease2e-0963.5
NC_017322:1260526:126853212685321269194663Sinorhizobium meliloti BL225C chromosome, complete genomenuclease3e-0962.4
NC_003919:3812778:383808738380873838824738Xanthomonas axonopodis pv. citri str. 306, complete genomesuccinoglycan biosynthesis protein2e-0860.1
NC_012918:2758775:280292328029232803216294Geobacter sp. M21 chromosome, complete genome1e-0860.1
NC_010172:57500:744217442175104684Methylobacterium extorquens PA1, complete genomenuclease (SNase domain protein)2e-0859.7
NC_007513:438438:462952462952463425474Synechococcus sp. CC9902, complete genomenuclease (SNase-like)3e-0859.3
NC_005070:1486496:152121015212101521866657Synechococcus sp. WH 8102, complete genomeStaphylococcal nuclease homologue3e-0859.3
NC_002678:341996:350305350305351066762Mesorhizobium loti MAFF303099, complete genomesuccinoglycan biosynthesis protein exoI1e-0654.3
NC_008255:1344674:136424313642431364743501Cytophaga hutchinsonii ATCC 33406, complete genomenuclease2e-0653.5
NC_009720:4124255:414748641474864147971486Xanthobacter autotrophicus Py2, complete genomenuclease1e-0653.5
NC_010424:825117:827685827685828668984Candidatus Desulforudis audaxviator MP104C, complete genomenuclease (SNase domain protein)3e-0652.4
NC_004463:2158116:222923222292322230020789Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein4e-0652
NC_017249:7993713:804956580495658050278714Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-0651.6
NC_014408:806720:815878815878816354477Methanothermobacter marburgensis str. Marburg chromosome, completenuclease6e-0651.6
NC_008148:2053467:207091520709152071490576Rubrobacter xylanophilus DSM 9941, complete genomenuclease (SNase-like)7e-0651.2
NC_013446:2961647:299424329942432994758516Comamonas testosteroni CNB-2, complete genomemicrococcal nuclease-like protein7e-0651.2