Pre_GI: BLASTP Hits

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Query: NC_002929:52500:74358 Bordetella pertussis Tohama I, complete genome

Start: 74358, End: 74939, Length: 582

Host Lineage: Bordetella pertussis; Bordetella; Alcaligenaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from a patient with whooping cough and has been studied extensively for over 40 years. Causative agent of whooping cough. This group of organisms is capable of invading the respiratory tract of animals and causing severe diseases. They express a number of virulence factors in order to do this including filamentous hemagglutins for attachment, cytotoxins, and proteins that form a type III secretion system for transport of effector molecules into host cells. This organism, which is unable to persist in the environment, is a strict human pathogen that causes whooping cough. Once a common cause of death in children the development of a vaccine has greatly decreased the number of deaths due to Bordetella pertussis. However, this organism infects and estimated 39 million people and kills hundreds of thousands of people each year.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017223:51180:743587435874939582Bordetella pertussis CS chromosome, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase3e-108390
NC_002928:507749:532483532483533064582Bordetella parapertussis 12822, complete genomeN-acetylmuramoyl-L-alanine amidase4e-108389
NC_002927:506183:533836533836534417582Bordetella bronchiseptica RB50, complete genomeN-acetylmuramoyl-L-alanine amidase2e-107387
NC_010645:406794:450383450383450994612Bordetella avium 197N, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase2e-74278
NC_018080:5070687:507373150737315074297567Pseudomonas aeruginosa DK2 chromosome, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase3e-50197
NC_020829:1068438:108490810849081085471564Pseudomonas denitrificans ATCC 13867, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase4e-50197
NC_008344:554229:557692557692558237546Nitrosomonas eutropha C91, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD7e-50196
NC_015410:969526:986337986337986888552Pseudomonas mendocina NK-01 chromosome, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase8e-50196
NC_007347:3204637:322724332272433227854612Ralstonia eutropha JMP134 chromosome 1, complete sequenceN-acetylmuramoyl-L-alanine amidase, family 21e-49195
NC_010694:891967:896775896775897350576Erwinia tasmaniensis, complete genomeN-acetylmuramyl L-alanine amydase5e-48190
NC_009439:860571:878735878735879286552Pseudomonas mendocina ymp, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase7e-48189
NC_013959:2666321:267620226762022676738537Sideroxydans lithotrophicus ES-1 chromosome, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD3e-47187
NC_016616:134449:135991135991136563573Dechlorosoma suillum PS chromosome, complete genomenegative regulator of beta-lactamase expression1e-46186
NC_012214:897206:902048902048902617570Erwinia pyrifoliae Ep1/96, complete genomeN-acetylmuramyl L-alanine amydase2e-46185
NC_009665:4675289:468353546835354684098564Shewanella baltica OS185 chromosome, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase4e-46184
NC_007912:1111093:113516711351671135766600Saccharophagus degradans 2-40, complete genomeProlyl-tRNA synthetase1e-45182
NC_021066:3201500:320667332066733207236564Raoultella ornithinolytica B6, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase5e-45180
NC_013971:817284:821377821377821946570Erwinia amylovora ATCC 49946 chromosome, complete genomeN-acetylmuramyl l-alanine amydase6e-45180
NC_013961:2932348:294943629494362950005570Erwinia amylovora, complete genomeProtein ampD6e-45180
NC_011663:4579777:458443845844384585001564Shewanella baltica OS223 chromosome, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase1e-44178
NC_011662:1160887:118389311838931184420528Thauera sp. MZ1T, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD6e-44176
NC_018868:3943088:396230739623073962897591Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeN-acetyl-anhydromuranmyl-L-alanine amidase9e-43172
NC_011901:625712:664744664744665313570Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeN-acetyl-anhydromuranmyl-L-alanine amidase2e-42172
NC_008321:458811:472477472477473016540Shewanella sp. MR-4, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD2e-42171
NC_015850:2451957:245308224530822453636555Acidithiobacillus caldus SM-1 chromosome, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD5e-42170
NC_012779:2127542:213393121339312134815885Edwardsiella ictaluri 93-146, complete genomeN-acetylmuramoyl-L-alanine amidase AmiD4e-1374.7
NC_013508:3188978:321210932121093212879771Edwardsiella tarda EIB202, complete genomeprobable N-acetylmuramoyl-L-alanine amidase9e-1373.2
NC_014532:1481787:150366215036621504546885Halomonas elongata DSM 2581, complete genomeN-acetylmuramoyl-L-alanine amidase domain protein1e-1273.2
NC_013956:1994970:200984520098452010738894Pantoea ananatis LMG 20103 chromosome, complete genomeYbjR2e-1272
NC_010067:892729:912875912875913576702Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1272
NC_016816:2508204:251215125121512513044894Pantoea ananatis LMG 5342, complete genomeN-acetylmuramoyl-L-alanine amidase AmiD3e-1271.6
NC_014932:1232346:126256212625621263332771Bartonella clarridgeiae 73, complete genomeN-acetylmuramoyl-L-alanine amidase amiD precursor4e-1271.2
NC_012779:3316877:332413933241393324909771Edwardsiella ictaluri 93-146, complete genomeN-acetylmuramoyl-L-alanine amidase AmiD6e-1270.9
NC_013961:1891000:190828819082881909157870Erwinia amylovora, complete genomeprobable N-acetylmuramoyl-L-alanine amidase8e-1270.1
NC_013971:1927510:194581519458151946684870Erwinia amylovora ATCC 49946 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase8e-1270.1
NC_013517:2633574:265363326536332654463831Sebaldella termitidis ATCC 33386, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD1e-1066.2
NC_002929:2589202:258920225892022590029828Bordetella pertussis Tohama I, complete genomeputative exported hydrolase1e-0755.8
NC_013595:3712257:3725059372505937265011443Streptosporangium roseum DSM 43021, complete genomeNegative regulator of beta-lactamase expression- like protein4e-0754.3
NC_019907:845663:849699849699850544846Liberibacter crescens BT-1 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-0652