Pre_GI: BLASTP Hits

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Query: NC_002929:52500:71391 Bordetella pertussis Tohama I, complete genome

Start: 71391, End: 71475, Length: 85

Host Lineage: Bordetella pertussis; Bordetella; Alcaligenaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from a patient with whooping cough and has been studied extensively for over 40 years. Causative agent of whooping cough. This group of organisms is capable of invading the respiratory tract of animals and causing severe diseases. They express a number of virulence factors in order to do this including filamentous hemagglutins for attachment, cytotoxins, and proteins that form a type III secretion system for transport of effector molecules into host cells. This organism, which is unable to persist in the environment, is a strict human pathogen that causes whooping cough. Once a common cause of death in children the development of a vaccine has greatly decreased the number of deaths due to Bordetella pertussis. However, this organism infects and estimated 39 million people and kills hundreds of thousands of people each year.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017223:51180:71391713917147585Bordetella pertussis CS chromosome, complete genometRNA-Leu2e-0754.3
NC_015458:2338437:23407622340762234084685Pusillimonas sp. T7-7 chromosome, complete genometRNA-Leu2e-0754.3
NC_010645:406794:44368444368444376885Bordetella avium 197N, complete genometRNA-Leu2e-0754.3
NC_002927:506183:53073953073953082385Bordetella bronchiseptica RB50, complete genometRNA-Leu2e-0754.3
NC_002928:507749:52938852938852947285Bordetella parapertussis 12822, complete genometRNA-Leu2e-0754.3
NC_014117:2608000:26127942612794261287885Burkholderia sp. CCGE1002 chromosome chromosome 1, completetRNA-Leu4e-0650.1
NC_006350:1084930:11122941112294111237885Burkholderia pseudomallei K96243 chromosome 1, complete sequencetRNA-Leu4e-0650.1