Pre_GI: BLASTN Hits

Some Help

Query: NC_002927:960369 Bordetella bronchiseptica RB50, complete genome

Start: 960369, End: 991599, Length: 31231

Host Lineage: Bordetella bronchiseptica; Bordetella; Alcaligenaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a rabbit. Causes a respiratory illness in animals. This group of organisms is capable of invading the respiratory tract of animals and causing severe diseases. They express a number of virulence factors in order to do this including filamentous hemagglutinins for attachment, cytotoxins, and proteins that form a type III secretion system for transport of effector molecules into host cells. Bordetella bronchiseptica, which is one of the few Bordetella that is capable of persisting in the environment, is rarely found in humans and is often associated with animals. This organism cause respiratory disease most commonly in pigs, rabbits and dogs.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002929:3305682*3305682333485129170Bordetella pertussis Tohama I, complete genome013250BLASTN svgBLASTP svg
NC_010170:4196197*4196197422572429528Bordetella petrii, complete genome01324BLASTN svgBLASTP svg
NC_010645:558974*55897458259923626Bordetella avium 197N, complete genome01302BLASTN svgBLASTP svg
NC_009434:3434381*3434381346411529735Pseudomonas stutzeri A1501, complete genome01191BLASTN svgBLASTP svg
NC_004431:51233255123325514909025766Escherichia coli CFT073, complete genome4e-160573BLASTN svgBLASTP svg
NC_008786:38459883845988387218826201Verminephrobacter eiseniae EF01-2, complete genome3e-145523BLASTN svgBLASTP svg
NC_010804:2960352*2960352297848118130Burkholderia multivorans ATCC 17616 chromosome 1, complete1e-104389BLASTN svgBLASTP svg
NC_014323:46656104665610471710351494Herbaspirillum seropedicae SmR1 chromosome, complete genome5e-101377BLASTN svgBLASTP svg
NC_009439:1174432*1174432119973625305Pseudomonas mendocina ymp, complete genome1e-86329BLASTN svgBLASTP svg
NC_013446:45116024511602453459922998Comamonas testosteroni CNB-2, complete genome1e-79305BLASTN svgBLASTP svg
NC_015635:3860570*3860570389185531286Microlunatus phosphovorus NM-1, complete genome5e-67264BLASTN svgBLASTP svg
NC_015410:1202370*1202370122824825879Pseudomonas mendocina NK-01 chromosome, complete genome3e-65258BLASTN svgBLASTP svg
NC_012856:29319952931995295427722283Ralstonia pickettii 12D chromosome 1, complete genome2e-60242BLASTN svgBLASTP svg
NC_014733:2095996*2095996211863222637Methylovorus sp. MP688 chromosome, complete genome9e-44186BLASTN svgBLASTP svg
NC_020064:2697116*2697116272016423049Serratia marcescens FGI94, complete genome4e-43184BLASTN svgBLASTP svg
NC_012969:2136243*2136243222535089108Methylovorus glucosetrophus SIP3-4 chromosome, complete genome6e-39170BLASTN svgBLASTP svg
NC_021066:839734*83973487672436991Raoultella ornithinolytica B6, complete genome2e-38168BLASTN svgBLASTP svg
NC_015731:3658956*3658956368280423849Nitrosomonas sp. Is79A3 chromosome, complete genome2e-35159BLASTN svgBLASTP svg
NC_015422:3184823*3184823320638321561Alicycliphilus denitrificans K601 chromosome, complete genome2e-35159BLASTN svgBLASTP svg
NC_008752:16687716687718811421238Acidovorax avenae subsp. citrulli AAC00-1, complete genome8e-35157BLASTN svgBLASTP svg
NC_010170:44096834409683443529725615Bordetella petrii, complete genome3e-34155BLASTN svgBLASTP svg
NC_015733:864959*86495989931634358Pseudomonas putida S16 chromosome, complete genome5e-33151BLASTN svgBLASTP svg
NC_012968:2000218*2000218202098120764Methylotenera mobilis JLW8, complete genome5e-33151BLASTN svgBLASTP svg
NC_012660:819381*81938184312223742Pseudomonas fluorescens SBW25 chromosome, complete genome2e-32149BLASTN svgBLASTP svg
NC_010067:11161481116148113933023183Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete3e-31145BLASTN svgBLASTP svg
NC_013508:1491945*1491945152068628742Edwardsiella tarda EIB202, complete genome3e-31145BLASTN svgBLASTP svg
NC_010995:764567*76456778991125345Cellvibrio japonicus Ueda107, complete genome1e-30143BLASTN svgBLASTP svg
NC_013446:3147202*3147202318258835387Comamonas testosteroni CNB-2, complete genome5e-27131BLASTN svgBLASTP svg
NC_015663:3586836*3586836361030823473Enterobacter aerogenes KCTC 2190 chromosome, complete genome2e-26129BLASTN svgBLASTP svg
NC_004547:2470978*2470978249481623839Erwinia carotovora subsp. atroseptica SCRI1043, complete genome2e-26129BLASTN svgBLASTP svg
NC_004578:1190000*1190000121945029451Pseudomonas syringae pv. tomato str. DC3000, complete genome7e-26127BLASTN svgBLASTP svg
NC_008609:20631320631324672140409Pelobacter propionicus DSM 2379, complete genome7e-26127BLASTN svgBLASTP svg
NC_010002:4572573*4572573461858346011Delftia acidovorans SPH-1, complete genome7e-26127BLASTN svgBLASTP svg
NC_010170:44630004463000451176948770Bordetella petrii, complete genome3e-25125BLASTN svgBLASTP svg
NC_010655:1808657*1808657182780319147Akkermansia muciniphila ATCC BAA-835, complete genome5e-24121BLASTN svgBLASTP svg
NC_013172:25565172556517257961323097Brachybacterium faecium DSM 4810, complete genome2e-23119BLASTN svgBLASTP svg
NC_013716:1918664*1918664194320924546Citrobacter rodentium ICC168, complete genome7e-23117BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome7e-23117BLASTN svgBLASTP svg
NC_013124:1439915*1439915146670526791Acidimicrobium ferrooxidans DSM 10331, complete genome3e-22115BLASTN svgBLASTP svg
NC_014121:1589389*1589389162248733099Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete1e-21113BLASTN svgBLASTP svg
NC_003116:1018813*1018813104163622824Neisseria meningitidis Z2491, complete genome1e-21113BLASTN svgBLASTP svg
NC_008595:11766581176658119686720210Mycobacterium avium 104, complete genome4e-21111BLASTN svgBLASTP svg
NC_008699:11327901132790117213739348Nocardioides sp. JS614, complete genome2e-20109BLASTN svgBLASTP svg
NC_020302:10741201074120109337319254Corynebacterium halotolerans YIM 70093 = DSM 44683, complete2e-20109BLASTN svgBLASTP svg
NC_015953:47469834746983477386726885Streptomyces sp. SirexAA-E chromosome, complete genome7e-20107BLASTN svgBLASTP svg
NC_018750:50787055078705510289824194Streptomyces venezuelae ATCC 10712, complete genome3e-19105BLASTN svgBLASTP svg
NC_014118:987889987889104450356615Burkholderia sp. CCGE1002 chromosome chromosome 2, complete3e-19105BLASTN svgBLASTP svg
NC_013204:989103989103101209922997Eggerthella lenta DSM 2243, complete genome3e-19105BLASTN svgBLASTP svg
NC_007643:4294818*4294818431506320246Rhodospirillum rubrum ATCC 11170, complete genome3e-19105BLASTN svgBLASTP svg
NC_015942:19206931920693194165820966Acidithiobacillus ferrivorans SS3 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_013421:2613137*2613137263682223686Pectobacterium wasabiae WPP163, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_014323:4792048*4792048483609944052Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_005125:34202703420270344513224863Gloeobacter violaceus PCC 7421, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_012803:17531381753138177628023143Micrococcus luteus NCTC 2665, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_010694:21380002138000218529147292Erwinia tasmaniensis, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_015161:758929*75892978593127003Deinococcus proteolyticus MRP chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_014500:2479814*2479814250755827745Dickeya dadantii 3937 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_008782:867344*86734489009922756Acidovorax sp. JS42, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_014210:14403614403616380119766Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,6e-1487.7BLASTN svgBLASTP svg
NC_013729:59820005982000600426322264Kribbella flavida DSM 17836, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_002939:20083042008304204522736924Geobacter sulfurreducens PCA, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_010831:12240001224000125317729178Chlorobium phaeobacteroides BS1, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_012214:2221702*2221702227363551934Erwinia pyrifoliae Ep1/96, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_003198:1771432*1771432180593534504Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-1281.8BLASTN svgBLASTP svg
NC_010725:2589014*2589014261596126948Methylobacterium populi BJ001, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_013521:29245402924540295147426935Sanguibacter keddieii DSM 10542, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_013961:1622616*1622616167386551250Erwinia amylovora, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014391:60008346000834602389723064Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015125:32840953284095330809924005Microbacterium testaceum StLB037, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_014033:77275477275479465621903Prevotella ruminicola 23 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_006677:1255079*1255079128032225244Gluconobacter oxydans 621H, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_012560:5338707*5338707537299934293Azotobacter vinelandii DJ, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_021150:5298500*5298500533099932500Azotobacter vinelandii CA6, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_007517:1468719*1468719150798939271Geobacter metallireducens GS-15, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_002932:296557*29655731908122525Chlorobium tepidum TLS, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_006677:10520311052031107540723377Gluconobacter oxydans 621H, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_011769:24720224720227380526604Desulfovibrio vulgaris str. 'Miyazaki F', complete genome6e-0867.9BLASTN svgBLASTP svg
NC_012724:1*11851018510Burkholderia glumae BGR1 chromosome 1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_013411:2191514*2191514221566224149Geobacillus sp. Y412MC61, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_014915:1331459*1331459135560624148Geobacillus sp. Y412MC52 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_019897:739577395712749553539Thermobacillus composti KWC4 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_002936:10045701004570102326218693Dehalococcoides ethenogenes 195, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008054:1030994*1030994106151930526Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete2e-0765.9BLASTN svgBLASTP svg
NC_010814:2758902*2758902278690628005Geobacter lovleyi SZ, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011666:23357652335765235876623002Methylocella silvestris BL2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012416:852000*85200087409922100Wolbachia sp. wRi, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012673:2368971*2368971238860519635Exiguobacterium sp. AT1b, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013222:299683*29968338036580683Robiginitalea biformata HTCC2501, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010337:2950500*2950500297409923600Heliobacterium modesticaldum Ice1, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_013037:6281164*6281164634134960186Dyadobacter fermentans DSM 18053, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014828:20386922038692208731548624Ethanoligenens harbinense YUAN-3 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014829:178000*17800020009922100Bacillus cellulosilyticus DSM 2522 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_008435:1215437*1215437131209196655Rhodopseudomonas palustris BisA53, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010556:2773396*2773396279691823523Exiguobacterium sibiricum 255-15, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010556:691498*69149871146719970Exiguobacterium sibiricum 255-15, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012673:2023297*2023297204277319477Exiguobacterium sp. AT1b, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_018664:3009166*3009166304846639301Clostridium acidurici 9a chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_018665:2563375*2563375258672623352Exiguobacterium antarcticum B7 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_018665:650847*65084766859917753Exiguobacterium antarcticum B7 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_007519:1782067*1782067181840436338Desulfovibrio alaskensis G20 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg