Pre_GI: BLASTP Hits

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Query: NC_002755:472872:493235 Mycobacterium tuberculosis CDC1551, complete genome

Start: 493235, End: 495307, Length: 2073

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain, also nicknamed "Oshkosh", is a recent clinical isolate from a clothing factory worker from the Kentucky/Tennessee, USA, region. It is highly contagious, infecting approximately 80% of the patient's social contacts. However, this strain has not caused epidemics in man and is sensitive to a wide range of drugs. It is also highly virulent in a mouse lung model, producing several orders of magnitude more bacteria than the H37Rv strain when inoculated. Causative agent of tuberculosis. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017026:476500:4921004921004941722073Mycobacterium tuberculosis RGTB327 chromosome, complete genomephosphate acetyltransferase01377
NC_016768:476500:4920454920454941172073Mycobacterium tuberculosis KZN 4207 chromosome, complete genomephosphate acetyltransferase pta01377
NC_012943:476500:4920454920454941172073Mycobacterium tuberculosis KZN 1435 chromosome, complete genomephosphate acetyltransferase01377
NC_009525:477093:4930964930964951682073Mycobacterium tuberculosis H37Ra, complete genomephosphate acetyltransferase01377
NC_009565:479500:4949564949564970282073Mycobacterium tuberculosis F11, complete genomephosphate acetyltransferase pta01377
NC_000962:475816:4917864917864938582073Mycobacterium tuberculosis H37Rv, complete genomephosphate acetyltransferase01377
NC_008769:507000:5226015226015246732073Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative phosphate acetyltransferase pta01375
NC_012207:477500:4929344929344950062073Mycobacterium bovis BCG str. Tokyo 172, complete genomephosphate acetyltransferase01375
NC_002945:476835:4928054928054948772073Mycobacterium bovis AF2122/97, complete genomephosphate acetyltransferase01375
NC_016804:477500:4929354929354950072073Mycobacterium bovis BCG str. Mexico chromosome, complete genomephosphate acetyltransferase01375
NC_015848:483500:5021555021555042272073Mycobacterium canettii CIPT 140010059, complete genomeputative phosphate acetyltransferase01373
NC_019950:481881:4981744981745002462073Mycobacterium canettii CIPT 140060008 complete genomePutative phosphate acetyltransferase Pta (phosphotransacetylase)01369
NC_010612:835648:8539878539878560712085Mycobacterium marinum M, complete genomephosphate acetyltransferase Pta01121
NC_016604:1285277:1286416128641612884882073Mycobacterium rhodesiae NBB3 chromosome, complete genomephosphate acetyltransferase01021
NC_013929:3206688:3224239322423932263442106Streptomyces scabiei 87.22 chromosome, complete genomephosphate acetyltransferase8e-174610
NC_009663:2056166:2069625206962520717242100Sulfurovum sp. NBC37-1, complete genomephosphate acetyltransferase5e-157555
NC_013715:98000:1116311116311137212091Rothia mucilaginosa DY-18, complete genomephosphotransacetylase2e-149530
NC_008800:1459015:1482848148284814850012154Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,phosphate acetyltransferase9e-114411
NC_014218:1437931:1454872145487214564911620Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomephosphate acetyltransferase5e-111402
NC_010694:1324250:1324250132425013263792130Erwinia tasmaniensis, complete genomePhosphate acetyltransferase4e-110399
NC_012779:2586175:2589897258989725920352139Edwardsiella ictaluri 93-146, complete genomephosphate acetyltransferase6e-110398
NC_012214:1438476:1438476143847614406052130Erwinia pyrifoliae Ep1/96, complete genomePhosphate acetyltransferase7e-110398
NC_013971:2478676:2496295249629524984392145Erwinia amylovora ATCC 49946 chromosome, complete genomephosphate acetyltransferase3e-109396
NC_013961:2441148:2458767245876724609112145Erwinia amylovora, complete genomephosphate acetyltransferase3e-109396
NC_009446:473960:4897804897804918372058Dichelobacter nodosus VCS1703A, complete genomephosphate acetyltransferase1e-108394
NC_002516:891000:9094189094189115322115Pseudomonas aeruginosa PAO1, complete genomephosphate acetyltransferase9e-108391
NC_011770:4924127:4926854492685449289682115Pseudomonas aeruginosa LESB58, complete genomephosphate acetyltransferase9e-108391
NC_016782:2058967:2058967205896720603341368Corynebacterium diphtheriae 241 chromosome, complete genomephospho acetyltransferase2e-106387
NC_016786:2059564:2059564205956420609311368Corynebacterium diphtheriae HC01 chromosome, complete genomephospho acetyltransferase2e-106387
NC_002935:2103677:2103677210367721051281452Corynebacterium diphtheriae NCTC 13129, complete genomephosphate acetyltransferase3e-106386
NC_009714:1084000:1098161109816110995971437Campylobacter hominis ATCC BAA-381, complete genomephosphate acetyltransferase (phosphotransacetylase)6e-104378
NC_004347:3028000:3047170304717030493232154Shewanella oneidensis MR-1, complete genomephosphate acetyltransferase1e-103377
NC_017215:1091941:1109069110906911109371869Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,phosphate acetyltransferase3e-98360
NC_017214:1727676:1744187174418717460551869Bifidobacterium animalis subsp. lactis BB-12 chromosome, completephosphate acetyltransferase3e-98360
NC_012814:1092860:1109574110957411112561683Bifidobacterium animalis subsp. lactis Bl-04, complete genomephosphate acetyltransferase3e-98359
NC_012815:1092795:1109509110950911111911683Bifidobacterium animalis subsp. lactis DSM 10140, complete genomephosphate acetyltransferase3e-98359
NC_011835:1819707:1836420183642018381021683Bifidobacterium animalis subsp. lactis AD011 chromosome, completephosphate acetyltransferase3e-98359
NC_017216:1092751:1109465110946511111471683Bifidobacterium animalis subsp. lactis BLC1, complete genomephosphate acetyltransferase3e-98359
NC_017217:1092916:1109630110963011113121683Bifidobacterium animalis subsp. lactis V9 chromosome, completephosphate acetyltransferase3e-98359
NC_013123:116465:116952116952117950999Candidatus Sulcia muelleri SMDSEM, complete genomephosphate acetyltransferase9e-98358
NC_015696:105748:1168131168131189092097Francisella sp. TX077308 chromosome, complete genomephosphate acetyltransferase8e-91335
NC_010336:733751:7415067415067436022097Francisella philomiragia subsp. philomiragia ATCC 25017, completePhosphate acetyltransferase5e-89329
NC_014964:1309845:132572813257281326726999Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completephosphate acetyltransferase7e-81302
NC_015958:1422319:143754614375461438544999Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomephosphate acetyltransferase1e-80301
NC_012658:2641446:265075626507562651754999Clostridium botulinum Ba4 str. 657 chromosome, complete genomephosphotransacetylase3e-80300
NC_009698:2420484:243688324368832437881999Clostridium botulinum A str. Hall chromosome, complete genomephosphotransacetylase5e-80299
NC_010516:2567911:258074125807412581739999Clostridium botulinum B1 str. Okra, complete genomephosphate acetyltransferase4e-80299
NC_009699:2635745:264121126412112642209999Clostridium botulinum F str. Langeland chromosome, complete genomephosphotransacetylase4e-80299
NC_017297:2635892:264135826413582642356999Clostridium botulinum F str. 230613 chromosome, complete genomephosphate acetyltransferase4e-80299
NC_009495:2571732:259251525925152593513999Clostridium botulinum A str. ATCC 3502 chromosome, complete genomephosphotransacetylase8e-80298
NC_012563:2761570:276703827670382768036999Clostridium botulinum A2 str. Kyoto, complete genomephosphate acetyltransferase1e-79298
NC_019978:1410041:142706514270651428063999Halobacteroides halobius DSM 5150, complete genomephosphate acetyltransferase6e-79295
NC_010520:2635750:265554326555432656541999Clostridium botulinum A3 str. Loch Maree, complete genomephosphate acetyltransferase3e-74280
NC_013165:1407000:140752614075261408521996Slackia heliotrinireducens DSM 20476, complete genomephosphotransacetylase2e-74280
NC_013515:65822:7927479274802991026Streptobacillus moniliformis DSM 12112, complete genomephosphate acetyltransferase4e-72273
NC_016023:1501553:151967915196791520650972Bacillus coagulans 36D1 chromosome, complete genomephosphate acetyltransferase1e-69265
NC_013192:305478:3277313277313287351005Leptotrichia buccalis DSM 1135, complete genomephosphate acetyltransferase3e-68260
NC_015634:2933712:293371229337122934689978Bacillus coagulans 2-6 chromosome, complete genomephosphate acetyltransferase3e-68260
NC_011026:2624775:2629909262990926309161008Chloroherpeton thalassium ATCC 35110, complete genomephosphate acetyltransferase1e-64248
NC_016077:2044876:2044876204487620458891014Acidaminococcus intestini RyC-MR95 chromosome, complete genomephosphate acetyltransferase3e-62239
NC_014365:2359760:2374217237421723764722256Desulfarculus baarsii DSM 2075 chromosome, complete genomemalic protein NAD-binding protein1e-56221
NC_006055:44649:588925889259860969Mesoplasma florum L1, complete genomephosphate acetyltransferase5e-53209
NC_015946:629681:637416637416638381966Mycoplasma putrefaciens KS1 chromosome, complete genomephosphate acetyltransferase1e-50201
NC_005364:292507:308545308545309513969Mycoplasma mycoides subsp. mycoides SC str. PG1, complete genomephosphate acetyltransferase1e-49198
NC_014729:800892:8186728186728209182247Halogeometricum borinquense DSM 11551 chromosome, complete genomeallosteric nADP-dependent malic enzyme9e-47189
NC_019949:525249:549512549512550471960Mycoplasma cynos C142 complete genomePhosphate acetyltransferase2e-46187
NC_012029:1525929:1543576154357615458282253Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomemalate dehydrogenase4e-46186
NC_015738:838715:842499842499843494996Eggerthella sp. YY7918, complete genomehypothetical protein2e-43177
NC_015761:2444833:2444833244483324471122280Salmonella bongori NCTC 12419, complete genomeNADP-dependent malate dehydrogenase2e-41171
NC_017328:2586171:2601731260173126040102280Shigella flexneri 2002017 chromosome, complete genomeputative multimodular enzyme6e-40166
NC_004741:2526421:2542226254222625445052280Shigella flexneri 2a str. 2457T, complete genomephosphate acetyltransferase6e-40166
NC_008258:2542863:2559907255990725621862280Shigella flexneri 5 str. 8401, complete genomeputative multimodular enzyme6e-40166
NC_004337:2548288:2564093256409325663722280Shigella flexneri 2a str. 301, complete genomephosphate acetyltransferase6e-40166
NC_015737:53682:7384373843748471005Clostridium sp. SY8519, complete genomehypothetical protein8e-40166
NC_014837:3126543:3126543312654331288222280Pantoea sp. At-9b chromosome, complete genomemalic protein NAD-binding protein2e-39164
NC_010634:3155741:3172658317265831749372280Yersinia pseudotuberculosis PB1/+, complete genomephosphate acetyl/butaryl transferase1e-38161
NC_006155:3237990:3254726325472632570052280Yersinia pseudotuberculosis IP 32953, complete genomephosphate acetyltransferase1e-38161
NC_009708:1497898:1497898149789815001772280Yersinia pseudotuberculosis IP 31758 chromosome, complete genomemalic enzyme1e-38161
NC_008800:1300500:1300535130053513028142280Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,malic enzyme2e-38160
NC_012880:3748665:3764211376421137664902280Dickeya dadantii Ech703, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase3e-38160
NC_011001:568970:5727085727085750082301Burkholderia cenocepacia J2315 chromosome 2, complete sequencemalic enzyme4e-38160
NC_008543:323773:3291503291503314502301Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceMalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase4e-38160
NC_010552:2131021:2134419213441921367192301Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceMalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase4e-37156
NC_014311:1545175:1554856155485615571832328Ralstonia solanacearum PSI07 chromosome, complete genomeNAD(P)-dependent malic enzyme8e-36152
NC_010645:3720501:3723726372372637260202295Bordetella avium 197N, complete genomemalic enzyme3e-35150
NC_014924:2961970:2974388297438829766822295Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomemalic protein NAD-binding protein4e-32140
NC_010511:2703684:2738270273827027406092340Methylobacterium sp. 4-46 chromosome, complete genomemalic enzyme1e-31139
NC_004663:2437760:2472243247224324745342292Bacteroides thetaiotaomicron VPI-5482, complete genomeNADP-dependent malate dehydrogenase1e-31138
NC_014933:3791840:3794621379462137969152295Bacteroides helcogenes P 36-108 chromosome, complete genomeallosteric NADP-dependent malic enzyme2e-29131
NC_008340:277223:2797642797642820942331Alkalilimnicola ehrlichei MLHE-1, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))4e-29130
NC_010338:4015928:4020469402046940227692301Caulobacter sp. K31, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase6e-29129
NC_014623:10036628:1003662810036628100389012274Stigmatella aurantiaca DW4/3-1 chromosome, complete genomemalate dehydrogenase9e-29129
NC_019960:659756:6597566597566620442289Prevotella dentalis DSM 3688 chromosome 1, complete sequencemalic enzyme2e-28127
NC_017059:376226:3940493940493963822334Rhodospirillum photometricum DSM 122, complete genomemalate dehydrogenase2e-27124
NC_010511:3947948:3956987395698739592722286Methylobacterium sp. 4-46 chromosome, complete genomemalic enzyme5e-27123
NC_010511:1351000:1367306136730613696152310Methylobacterium sp. 4-46 chromosome, complete genomemalic enzyme5e-26120
NC_014100:1144463:1158747115874711610352289Caulobacter segnis ATCC 21756 chromosome, complete genomemalate dehydrogenase8e-26119
NC_002696:2829002:2833465283346528357412277Caulobacter crescentus CB15, complete genomephosphate acetyltransferase3e-25117
NC_013446:4182878:4184707418470741870042298Comamonas testosteroni CNB-2, complete genomephosphate acetyltransferase4e-24113
NC_009615:2039964:2051646205164620539342289Parabacteroides distasonis ATCC 8503 chromosome, complete genomemalic enzyme1e-23111
NC_014931:4985500:4985729498572949880322304Variovorax paradoxus EPS chromosome, complete genomemalic protein NAD-binding protein5e-22106
NC_015563:5162177:5167308516730851696052298Delftia sp. Cs1-4 chromosome, complete genomemalic protein NAD-binding protein1e-21105
NC_010002:2293670:2308601230860123108982298Delftia acidovorans SPH-1, complete genomeMalate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase1e-21105
NC_007802:179780:2027042027042049682265Jannaschia sp. CCS1, complete genomeMalate dehydrogenase (oxaloacetate decarboxylating) (NADP+)., Phosphate acetyltransferase4e-21103
NC_008044:3024125:3046844304684430490992256Silicibacter sp. TM1040, complete genomeMalate dehydrogenase (oxaloacetate decarboxylating) (NADP+)., Phosphate acetyltransferase1e-1999
NC_012985:1:1281812818151572340Candidatus Liberibacter asiaticus str. psy62, complete genomemalic enzyme5e-1480.1
NC_018870:484000:497887497887498819933Thermacetogenium phaeum DSM 12270 chromosome, complete genomephosphate butyryltransferase Ptb2e-1068.2
NC_015164:1812439:182937318293731830302930Bacteroides salanitronis DSM 18170 chromosome, complete genomePhosphate butyryltransferase8e-1066.2
NC_012793:2337776:235671023567102357609900Geobacillus sp. WCH70, complete genomephosphate butyryltransferase1e-0965.5
NC_003869:2099000:211373521137352114643909Thermoanaerobacter tengcongensis MB4, complete genomephosphate acetyltransferase3e-0964.3
NC_010718:2492895:249736324973632498277915Natranaerobius thermophilus JW/NM-WN-LF, complete genomephosphate butyryltransferase5e-0963.5
NC_010003:1577934:158606515860651586967903Petrotoga mobilis SJ95, complete genomePhosphate butyryltransferase7e-0963.2
NC_016593:2447938:244906624490662450028963Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completephosphate butyryltransferase7e-0963.2
NC_016751:142237:150230150230151123894Marinitoga piezophila KA3 chromosome, complete genomephosphotransacetylase1e-0862.4
NC_013446:4281250:428330442833044284269966Comamonas testosteroni CNB-2, complete genomephosphate acetyl/butaryl transferase3e-0861.2
NC_012791:4007780:402140140214014022354954Variovorax paradoxus S110 chromosome 1, complete genomePhosphate acetyltransferase3e-0861.2
NC_010516:3724312:373767737376773738588912Clostridium botulinum B1 str. Okra, complete genomephosphate butyryltransferase2e-0861.2
NC_012563:3921859:393452839345283935439912Clostridium botulinum A2 str. Kyoto, complete genomephosphate butyryltransferase2e-0861.2
NC_009697:3629250:364261336426133643524912Clostridium botulinum A str. ATCC 19397 chromosome, completephosphate butyryltransferase2e-0861.2
NC_009698:3526359:353972235397223540633912Clostridium botulinum A str. Hall chromosome, complete genomephosphate butyryltransferase2e-0861.2
NC_009699:3753599:376945637694563770367912Clostridium botulinum F str. Langeland chromosome, complete genomephosphate butyryltransferase2e-0861.2
NC_017297:3752000:376807037680703768981912Clostridium botulinum F str. 230613 chromosome, complete genomephosphate butyryltransferase2e-0861.2
NC_009434:796878:795949795949796881933Pseudomonas stutzeri A1501, complete genomephosphate acetyltransferase4e-0860.8
NC_012658:3744000:375754037575403758451912Clostridium botulinum Ba4 str. 657 chromosome, complete genomephosphate butyryltransferase4e-0860.5
NC_010520:3753875:376719137671913768102912Clostridium botulinum A3 str. Loch Maree, complete genomephosphate butyryltransferase4e-0860.5
NC_015601:1463500:147703914770391477935897Erysipelothrix rhusiopathiae str. Fujisawa, complete genomephosphate butyryltransferase5e-0860.1
NC_008314:1825223:184139418413941842332939Ralstonia eutropha H16 chromosome 2, complete sequencePhosphotransacetylase1e-0758.9
NC_015958:2206032:223427222342722235168897Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomephosphate butyryltransferase1e-0758.9
NC_010172:57500:591585915860132975Methylobacterium extorquens PA1, complete genomePhosphate butyryltransferase2e-0758.5
NC_011653:331986:342783342783343694912Thermosipho africanus TCF52B, complete genomephosphate acetyltransferase3e-0757.4
NC_009616:99647:109207109207110118912Thermosipho melanesiensis BI429 chromosome, complete genomephosphate butyryltransferase3e-0757.4
NC_014538:1942500:195370819537081954604897Thermoanaerobacter sp. X513 chromosome, complete genomephosphate butyryltransferase6e-0756.6
NC_003869:2099000:210611521061152107017903Thermoanaerobacter tengcongensis MB4, complete genomePhosphotransacetylase2e-0655.5
NC_014538:1942500:194718419471841948074891Thermoanaerobacter sp. X513 chromosome, complete genomephosphate butyryltransferase5e-0653.5
NC_014910:2930860:294120329412032942177975Alicycliphilus denitrificans BC chromosome, complete genomephosphate acetyltransferase7e-0653.1
NC_012691:2614603:2699770269977027011911422Tolumonas auensis DSM 9187, complete genomePhosphate acetyltransferase9e-0652.8