Pre_GI: BLASTP Hits

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Query: NC_002755:2788000:2788211 Mycobacterium tuberculosis CDC1551, complete genome

Start: 2788211, End: 2789476, Length: 1266

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain, also nicknamed "Oshkosh", is a recent clinical isolate from a clothing factory worker from the Kentucky/Tennessee, USA, region. It is highly contagious, infecting approximately 80% of the patient's social contacts. However, this strain has not caused epidemics in man and is sensitive to a wide range of drugs. It is also highly virulent in a mouse lung model, producing several orders of magnitude more bacteria than the H37Rv strain when inoculated. Causative agent of tuberculosis. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017026:2786000:2786349278634927876141266Mycobacterium tuberculosis RGTB327 chromosome, complete genomeputative carboxylesterase LIPQ0818
NC_016804:2735897:2735897273589727371621266Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative carboxylesterase0818
NC_012207:2747599:2749303274930327505681266Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative carboxylesterase0818
NC_009525:2802987:2804691280469128059561266Mycobacterium tuberculosis H37Ra, complete genomecarboxylesterase LipQ0818
NC_008769:2754828:2756532275653227577971266Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative carboxylesterase lipQ0818
NC_002945:2757821:2759525275952527607901266Mycobacterium bovis AF2122/97, complete genomecarboxylesterase LipQ0818
NC_000962:2791019:2792723279272327939881266Mycobacterium tuberculosis H37Rv, complete genomePROBABLE CARBOXYLESTERASE LIPQ0818
NC_009565:2806000:2806039280603928073041266Mycobacterium tuberculosis F11, complete genomecarboxylesterase lipQ0818
NC_007777:3231649:3251707325170732527171011Frankia sp. CcI3, complete genomeAlpha/beta hydrolase fold-36e-1995.5
NC_011898:2509267:252684325268432527778936Clostridium cellulolyticum H10, complete genomeAlpha/beta hydrolase fold-3 domain protein3e-1686.7
NC_013730:4811911:483033848303384831315978Spirosoma linguale DSM 74, complete genomehypothetical protein4e-1686.3
NC_013158:200424:2184912184912195131023Halorhabdus utahensis DSM 12940, complete genomelipase/esterase2e-1480.5
NC_008601:753221:776065776065777051987Francisella tularensis subsp. novicida U112, complete genomehypothetical protein2e-1480.1
NC_006322:3198829:321828932182893219185897Bacillus licheniformis ATCC 14580, complete genomehypothetical protein7e-1479
NC_001263:132288:132288132288133178891Deinococcus radiodurans R1 chromosome 1, complete sequencelipase/esterase, putative8e-1478.6
NC_013158:1620761:1628800162880016298011002Halorhabdus utahensis DSM 12940, complete genomeEsterase/lipase-like protein1e-1274.7
NC_016612:5231065:526889552688955269851957Klebsiella oxytoca KCTC 1686 chromosome, complete genomealpha/beta hydrolase fold domain protein2e-1170.9
NC_008010:222516:242562242562243506945Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencelipase, active site3e-1170.1
NC_014206:2971304:297909429790942979924831Geobacillus sp. C56-T3 chromosome, complete genomehypothetical protein6e-1169.3
NC_013192:1824174:183528918352891836158870Leptotrichia buccalis DSM 1135, complete genomehypothetical protein4e-1066.6
NC_012781:2148478:215818721581872159035849Eubacterium rectale ATCC 33656, complete genomeputative lipase/esterase8e-1065.5
NC_015510:1234500:123673912367391237584846Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomephospholipase/carboxylesterase1e-0964.7
NC_013747:129394:1432631432631442761014Haloterrigena turkmenica DSM 5511 plasmid pHTUR04, completeEsterase/lipase-like protein2e-0963.9
NC_017219:1622050:162337516233751624310936Bifidobacterium longum subsp. infantis ATCC 15697, complete genomelipase/esterase4e-0962.8
NC_011593:1622260:162358516235851624520936Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,hypothetical protein4e-0962.8
NC_015067:998500:101266010126601013595936Bifidobacterium longum subsp. longum JCM 1217, complete genomelipase/esterase2e-0861.2
NC_010816:621849:624044624044624979936Bifidobacterium longum DJO10A, complete genomeEsterase/lipase2e-0861.2
NC_015052:1094825:111261611126161113551936Bifidobacterium longum subsp. infantis 157F, complete genomelipase/esterase2e-0860.8
NC_014727:1136589:115751711575171158371855Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,hydrolase, alpha/beta domain protein2e-0860.5
NC_004307:579729:587917587917588852936Bifidobacterium longum NCC2705, complete genomehypothetical protein with similarity to lipase and esterase3e-0860.1
NC_012669:4323490:4340163434016343412181056Beutenbergia cavernae DSM 12333, complete genomeAlpha/beta hydrolase fold-3 domain protein4e-0859.7
NC_017218:1042298:104611810461181047053936Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomepeptidase, S9A/B/C family, catalytic domain protein4e-0859.7
NC_017221:1222963:122418012241801225115936Bifidobacterium longum subsp. longum KACC 91563 chromosome,lipase/esterase5e-0859.3
NC_012731:2739964:274783927478392748822984Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeesterase/lipase2e-0757
NC_016845:2781438:278820627882062789162957Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,esterase/lipase2e-0757