Some Help

Query: NC_002655:4653160:4658240 Escherichia coli O157:H7 EDL933, complete genome

Start: 4658240, End: 4658986, Length: 747

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (substrain) is considered a reference strain of O157:H7, which was first isolated during an outbreak in 1982. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora.E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013008:4643825:464840246484024649148747Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III effector2e-109394
NC_002695:4584177:458925745892574590003747Escherichia coli O157:H7 str. Sakai, complete genomeEspF2e-109394
NC_013941:4470932:447674944767494477513765Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeespF4e-108390
NC_011601:4096427:410327141032714103891621Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeLEE-encoded effector EspF5e-74277
NC_013364:3701895:372061137206113721399789Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector EspF1e-73276
NC_013353:3669500:367887136788713679755885Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector EspF2e-68258
AP010958:3669500:367887136788713679755885Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector EspF2e-68258
NC_013716:3109700:314688131468813147786906Citrobacter rodentium ICC168, complete genomeT3SS effector protein EspF2e-63242
NC_011353:4688000:469236146923614692798438Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprotein EspF1e-63242
NC_013361:5319497:536404553640455364668624Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector EspF8e-59226
NC_013008:2561586:2576142257614225771551014Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeTir-cytoskeleton coupling protein (TccP)3e-0858.9
NC_002695:2655445:2669551266955126705641014Escherichia coli O157:H7 str. Sakai, complete genomeEspF-like protein3e-0858.9
NC_002655:2730659:2744768274476827459221155Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933U4e-0858.5
NC_011353:2563056:257746525774652578175711Escherichia coli O157:H7 str. EC4115 chromosome, complete genometir-cytoskeleton coupling protein8e-0857.8
NC_011353:1195179:121414312141431214895753Escherichia coli O157:H7 str. EC4115 chromosome, complete genome2e-0756.2
NC_013941:2425233:243933924393392440211873Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeTir-cytoskeleton coupling protein3e-0755.5