Pre_GI: BLASTP Hits

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Query: NC_002516:3079850:3094757 Pseudomonas aeruginosa PAO1, complete genome

Start: 3094757, End: 3096052, Length: 1296

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020829:1:1056710567119461380Pseudomonas denitrificans ATCC 13867, complete genomeputative type I restriction enzyme, S subunit7e-148524
NC_014973:3452100:3487751348775134891301380Geobacter sp. M18 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein7e-100364
NC_015422:2126614:2142598214259821440221425Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein2e-56219
NC_009943:305854:3181503181503193911242Candidatus Desulfococcus oleovorans Hxd3, complete genomerestriction modification system DNA specificity domain2e-56219
NC_014632:1112733:1145320114532011466211302Ilyobacter polytropus DSM 2926 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-50199
NC_003901:3591500:3598245359824535996271383Methanosarcina mazei Go1, complete genometype I restriction-modification system specificity subunit2e-46186
NC_003919:3396136:3402660340266034039401281Xanthomonas axonopodis pv. citri str. 306, complete genometype I restriction-modification system specificity determinant6e-42172
NC_013861:3341955:3344087334408733454871401Legionella longbeachae NSW150, complete genometype I restriction-modification system (methylase_S)4e-40166
NC_006512:696000:6980826980826994281347Idiomarina loihiensis L2TR, complete genomeRestriction endonuclease S subunit6e-40165
NC_014008:1463795:1483479148347914848221344Coraliomargarita akajimensis DSM 45221 chromosome, complete genomerestriction modification system DNA specificity domain protein8e-36151
NC_013446:1724000:1729654172965417309431290Comamonas testosteroni CNB-2, complete genomehypothetical protein1e-35151
NC_008942:815280:8215758215758229151341Methanocorpusculum labreanum Z, complete genomehypothetical protein1e-35150
NC_008789:1237969:1256434125643412577231290Halorhodospira halophila SL1, complete genomerestriction modification system DNA specificity domain1e-34147
NC_008740:257434:2748562748562762411386Marinobacter aquaeolei VT8, complete genomerestriction modification system DNA specificity domain3e-34146
NC_008255:3331613:3360658336065833619561299Cytophaga hutchinsonii ATCC 33406, complete genomeprobable type I restriction-modification system9e-32138
NC_013161:4093322:4102957410295741043271371Cyanothece sp. PCC 8802, complete genomerestriction modification system DNA specificity domain protein1e-31137
NC_009656:44500:8547085470868641395Pseudomonas aeruginosa PA7 chromosome, complete genometype I restriction-modification system subunit S3e-31136
NC_008787:685401:7055047055047067721269Campylobacter jejuni subsp. jejuni 81-176, complete genometype I restriction modification DNA specificity domain protein1e-30134
NC_008751:607209:6192036192036205191317Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomerestriction modification system DNA specificity domain7e-30132
NC_007484:3035068:3044928304492830463911464Nitrosococcus oceani ATCC 19707, complete genomeRestriction endonuclease S subunits-like5e-29129
NC_014506:157396:1630731630731644011329Sulfurimonas autotrophica DSM 16294 chromosome, complete genomeRestriction endonuclease S subunit9e-29128
NC_006510:2910000:2931510293151029328261317Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system specificity determinant1e-28128
NC_010498:4856011:4859524485952448608101287Escherichia coli SMS-3-5, complete genometype I restriction modification DNA specificity domain-containing protein1e-27124
NC_014972:247028:2484182484182494911074Desulfobulbus propionicus DSM 2032 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein7e-27122
NC_008702:1:90359035103841350Azoarcus sp. BH72, complete genomeType I site-specific deoxyribonuclease5e-27122
NC_015663:2090442:2112256211225621135961341Enterobacter aerogenes KCTC 2190 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-26121
NC_007519:2847816:2856595285659528579411347Desulfovibrio alaskensis G20 chromosome, complete genometype I restriction-modification system, S subunit1e-26121
NC_008340:2034810:2045005204500520462641260Alkalilimnicola ehrlichei MLHE-1, complete genomerestriction modification system DNA specificity domain2e-25117
NC_016944:1937645:1958591195859119599191329Vibrio cholerae IEC224 chromosome I, complete sequencetype I restriction enzyme, S subunit2e-25117
NC_016445:1363831:1383683138368313850231341Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetype I restriction enzyme, S subunit2e-25117
NC_008752:3684739:3713465371346537147541290Acidovorax avenae subsp. citrulli AAC00-1, complete genomerestriction modification system DNA specificity domain3e-25116
NC_002505:1892430:1912283191228319136711389Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein3e-25116
NC_009457:1444449:1465386146538614667741389Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein2e-25116
NC_012578:1838470:1859416185941618608041389Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein2e-25116
NC_012582:1976962:1996805199680519981931389Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein2e-25116
NC_014370:885937:9180299180299193151287Prevotella melaninogenica ATCC 25845 chromosome chromosome I,type I restriction modification DNA specificity domain protein3e-24113
NC_008740:443274:4727574727574740761320Marinobacter aquaeolei VT8, complete genomerestriction modification system DNA specificity domain3e-24113
NC_008322:2077628:2102612210261221039581347Shewanella sp. MR-7, complete genomerestriction modification system DNA specificity domain4e-24113
NC_011901:625712:6338466338466352221377Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype I restriction-modification system, S subunit5e-24112
NC_020156:861402:8652618652618665051245Nonlabens dokdonensis DSW-6, complete genometype I restriction-modification system S(specificity) subunit4e-24112
NC_015164:493159:5474975474975487861290Bacteroides salanitronis DSM 18170 chromosome, complete genomerestriction modification system DNA specificity domain1e-23111
NC_015953:4746983:4757318475731847586491332Streptomyces sp. SirexAA-E chromosome, complete genomeRestriction endonuclease S subunits-like protein3e-23110
NC_005773:106000:1218821218821232281347Pseudomonas syringae pv. phaseolicola 1448A, complete genometype I restriction-modification system specificity subunit2e-23110
NC_014479:700281:7099167099167112171302Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeType I restriction modification system DNA specificity domain protein (HsdS)2e-23110
NC_016816:3952000:3974895397489539762801386Pantoea ananatis LMG 5342, complete genometype I restriction-modification system specificity subunit S2e-23110
NC_016816:3974895:3974895397489539762801386Pantoea ananatis LMG 5342, complete genometype I restriction-modification system specificity subunit S2e-23110
NC_016584:1998000:2044072204407220453071236Desulfosporosinus orientis DSM 765 chromosome, complete genomerestriction endonuclease S subunit4e-23109
NS_000195:219785:2500322500322513541323Candidatus Cloacamonas acidaminovoransputative Type I restriction-modification system specificity subunit2e-22107
NC_007404:2743877:2758249275824927594511203Thiobacillus denitrificans ATCC 25259, complete genomeputative restriction endonuclease S subunit2e-22107
NC_009049:1934398:1962148196214819635181371Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencerestriction modification system DNA specificity domain4e-22106
NC_013515:715009:7417177417177431381422Streptobacillus moniliformis DSM 12112, complete genomerestriction modification system DNA specificity domain protein3e-22106
NC_016830:5994494:6005173600517360065461374Pseudomonas fluorescens F113 chromosome, complete genomeType I restriction-modification system, specificity subunit S1e-21104
NC_010831:788500:7976347976347989441311Chlorobium phaeobacteroides BS1, complete genomeputative type I restriction-modification system1e-21104
NC_015576:1442713:145529414552941456130837Mycobacterium sp. JDM601 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-21103
NC_005966:3334864:3350154335015433515001347Acinetobacter sp. ADP1, complete genomeputative type I restriction-modification system specificity determinant for hsdM and hsdR (HsdS)2e-21103
NC_015563:4911188:4921644492164449229751332Delftia sp. Cs1-4 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-21103
NC_014253:431942:4581784581784595631386Methanohalobium evestigatum Z-7303 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein5e-21102
NC_014366:1435785:1438219143821914393101092Gamma proteobacterium HdN1, complete genome6e-21102
NC_009434:281474:2873472873472886121266Pseudomonas stutzeri A1501, complete genometype I restriction-modification system, S subunit6e-21102
NC_006350:1084930:1106431110643111077201290Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative type I restriction enzyme specificity protein9e-21101
NC_012669:1700626:1710630171063017119131284Beutenbergia cavernae DSM 12333, complete genomerestriction modification system DNA specificity domain protein3e-2099.8
NC_012691:2476223:2493223249322324944881266Tolumonas auensis DSM 9187, complete genomerestriction modification system DNA specificity domain protein5e-2099.4
NC_014408:1340016:1352967135296713542741308Methanothermobacter marburgensis str. Marburg chromosome, completetype I restriction-modification enzyme, subunit S8e-2098.6
NC_013862:27991:4442444258031362Allochromatium vinosum DSM 180 plasmid pALVIN02, complete sequencerestriction modification system DNA specificity domain protein3e-1996.7
NC_018720:2138180:2150752215075221521011350Bifidobacterium asteroides PRL2011 chromosome, complete genometype I restriction-modification system1e-1894.7
NC_009077:2308634:2321856232185623232111356Mycobacterium sp. JLS, complete genomerestriction modification system DNA specificity domain7e-1892
NC_017506:1660072:1665738166573816670211284Marinobacter adhaerens HP15 chromosome, complete genometype I site-specific restriction-modification system, S subunit8e-1892
NC_014328:303063:3449343449343461871254Clostridium ljungdahlii ATCC 49587 chromosome, complete genometype I restriction enzyme, specificity subunit1e-1791.7
NC_019896:3311000:3323359332335933246391281Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completerestriction modification system DNA specificity domain-containing protein1e-1791.7
NC_014650:1893758:1911301191130119125301230Geobacillus sp. Y4.1MC1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-1791.3
NC_012779:3316877:333351633335163334487972Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-1790.9
NC_015660:3174424:3182135318213531835531419Geobacillus thermoglucosidasius C56-YS93 chromosome, completerestriction modification system DNA specificity domain-containing protein3e-1789.7
NC_009634:299327:3072993072993085221224Methanococcus vannielii SB chromosome, complete genomerestriction modification system DNA specificity subunit4e-1789.4
NC_015572:4618467:4638997463899746404661470Methylomonas methanica MC09 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-1687.8
NC_016590:1380092:1386288138628813874661179Burkholderia sp. YI23 chromosome 3, complete sequencerestriction endonuclease S subunits-like protein2e-1687
NC_017195:709098:7177537177537190571305Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetype I restriction-modification system specificity determinant3e-1687
NC_016782:1076619:1083560108356010847531194Corynebacterium diphtheriae 241 chromosome, complete genometype I restriction enzyme, S subunit4e-1686.3
NC_016786:1079000:1083532108353210847251194Corynebacterium diphtheriae HC01 chromosome, complete genometype I restriction enzyme, S subunit4e-1686.3
NC_019964:2816990:2836848283684828381791332Halovivax ruber XH-70, complete genomerestriction endonuclease S subunit7e-1685.5
NC_015737:831792:8542308542308554021173Clostridium sp. SY8519, complete genomehypothetical protein2e-1583.6
NC_015416:621513:6339436339436351991257Methanosaeta concilii GP-6 chromosome, complete genometype I restriction-modification enzyme, S subunit3e-1583.2
NC_007793:459045:4590454590454602561212Staphylococcus aureus subsp. aureus USA300, complete genomeputative restriction/modification system specificity protein8e-1582
NC_010079:458940:4589404589404601511212Staphylococcus aureus subsp. aureus USA300_TCH1516, completetype I site-specific deoxyribonuclease specificity subunit8e-1582
NC_002745:450000:4525494525494537601212Staphylococcus aureus subsp. aureus N315, complete genomeprobable restriction modification system specificity subunit8e-1582
NC_002758:475516:4770654770654782761212Staphylococcus aureus subsp. aureus Mu50, complete genomeprobable restriction modification system specificity subunit8e-1582
NC_009487:486000:4878104878104890211212Staphylococcus aureus subsp. aureus JH9 chromosome, completerestriction modification system DNA specificity subunit8e-1582
NC_009632:486331:4878804878804890911212Staphylococcus aureus subsp. aureus JH1 chromosome, completerestriction modification system DNA specificity subunit8e-1582
NC_009641:448640:4486404486404498511212Staphylococcus aureus subsp. aureus str. Newman chromosome,type I restriction modification system, site specificity determination subunit8e-1582
NC_013450:412122:4136714136714148821212Staphylococcus aureus subsp. aureus ED98, complete genometype I restriction-modification system S subunit8e-1582
NC_017341:472685:4726854726854738961212Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,restriction endonuclease S subunit8e-1582
NC_017343:416834:4168344168344180451212Staphylococcus aureus subsp. aureus ECT-R 2, complete genometype I restriction modification DNA specificity domain protein8e-1582
NC_017347:469024:4690244690244702351212Staphylococcus aureus subsp. aureus T0131 chromosome, completeRestriction modification system DNA specificity domain protein8e-1582
NC_008271:140846:1461601461601473351176Rhodococcus sp. RHA1 plasmid pRHL3, complete sequencetype I restriction-modification system specificity subunit2e-1480.5
NC_014973:3414459:3431795343179534330301236Geobacter sp. M18 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-1377.8
NC_007644:1694879:1707326170732617086541329Moorella thermoacetica ATCC 39073, complete genomeRestriction modification system DNA specificity domain3e-1377
NC_009051:1074993:1084146108414610853301185Methanoculleus marisnigri JR1, complete genomerestriction modification system DNA specificity domain6e-1375.9
NC_020541:1717140:1726398172639817276871290Rhodanobacter sp. 2APBS1, complete genomerestriction endonuclease S subunit9e-1375.1
NC_013093:1036772:1069664106966410709921329Actinosynnema mirum DSM 43827, complete genomerestriction modification system DNA specificity domain protein9e-1375.1
NC_014618:690056:7105557105557117391185Enterobacter cloacae SCF1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-1274.3
NC_019977:302454:3096423096423111471506Methanomethylovorans hollandica DSM 15978, complete genomerestriction endonuclease S subunit2e-1274.3
NC_012668:1688500:173472217347221735225504Vibrio cholerae MJ-1236 chromosome 1, complete sequencetype I restriction-modification system specificity subunit2e-1273.9
NC_011666:1661491:1673298167329816746171320Methylocella silvestris BL2, complete genometype I restriction enzyme2e-1273.9
NC_017093:7255652:7266636726663672678231188Actinoplanes missouriensis 431, complete genomeputative restriction-modification system DNA specificity domain2e-1273.9
NC_014363:1902868:1912983191298319145601578Olsenella uli DSM 7084 chromosome, complete genomerestriction modification system DNA specificity domain protein4e-1273.2
NC_014752:1530000:153707615370761537693618Neisseria lactamica ST-640, complete genomerestriction modification system DNA specificity domain1e-1171.6
NC_014306:4376012:4402909440290944046391731Erwinia billingiae Eb661, complete genomeType I restriction-modification system, S subunit1e-1171.6
NC_013929:3299736:332822233282223328884663Streptomyces scabiei 87.22 chromosome, complete genometype I restriction protein fragment2e-1170.9
NC_018645:13408:2450224502257221221Desulfobacula toluolica Tol2, complete genometype-1 restriction enzyme EcoKI specificity protein6e-1169.3
NC_018691:3437821:3449748344974834512081461Alcanivorax dieselolei B5 chromosome, complete genomeRestriction modification system DNA specificity domain protein6e-1169.3
NC_007508:570000:5767025767025779611260Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometype I site-specific deoxyribonuclease (specificity subunit)1e-1068.2
NC_009052:5089963:5088875508887550899661092Shewanella baltica OS155, complete genomerestriction modification system DNA specificity domain1e-1068.2
NC_007413:1405817:1418019141801914193831365Anabaena variabilis ATCC 29413, complete genomeRestriction modification system DNA specificity domain1e-1067.8
NC_007086:3805390:3812748381274838140641317Xanthomonas campestris pv. campestris str. 8004, complete genomeputative restriction endonuclease S subunits2e-1067.4
NC_010688:3740399:3747058374705837483741317Xanthomonas campestris pv. campestris, complete genomeType I site-specific deoxyribonuclease (specificity subunit)2e-1067.4
NC_016147:2337244:2348124234812423492871164Pseudoxanthomonas spadix BD-a59 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0964.7
NC_009974:53865:6261262612638681257Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU02, completerestriction modification system DNA specificity subunit1e-0964.7
NC_014217:2760898:2772811277281127739891179Starkeya novella DSM 506 chromosome, complete genomerestriction modification system DNA specificity domain protein1e-0964.7
NC_015703:3880903:3901289390128939026681380Runella slithyformis DSM 19594 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-0963.5
NC_015434:4640769:4650705465070546519911287Verrucosispora maris AB-18-032 chromosome, complete genomerestriction modification system DNA specificity subunit3e-0963.5
NC_008054:899441:9101449101449113791236Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeType I restriction-modification system, specificity subunit4e-0963.2
NC_002953:15416:3758837588388981311Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative type I restriction enzyme specificity protein4e-0962.8
NC_015320:1690047:1699124169912417003861263Archaeoglobus veneficus SNP6 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein4e-0962.8
NC_016612:2009927:2018525201852520200031479Klebsiella oxytoca KCTC 1686 chromosome, complete genometype I restriction-modification system subunit S1e-0758.2
NC_010682:3313944:3325497332549733266811185Ralstonia pickettii 12J chromosome 1, complete sequencerestriction modification system, type I2e-0757.4
NC_012108:2194251:2194251219425121955311281Desulfobacterium autotrophicum HRM2, complete genomeHsdS22e-0757.4
NC_018876:587094:6087896087896100811293Methanolobus psychrophilus R15 chromosome, complete genometype I restriction-modification system, S subunit3e-0757
NC_014365:2810405:2832411283241128336461236Desulfarculus baarsii DSM 2075 chromosome, complete genomerestriction modification system DNA specificity domain protein7e-0755.8
NC_014974:758129:7645347645347655921059Thermus scotoductus SA-01 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0655.1
NC_006672:47610:6642766427676351209Gluconobacter oxydans 621H plasmid pGOX1, complete sequenceType I restriction-modification enzyme S subunit1e-0655.1
NC_006510:1400000:1406089140608914072641176Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system specificity protein1e-0654.7
NC_007498:3399478:3416488341648834176721185Pelobacter carbinolicus DSM 2380, complete genomerestriction endonuclease S subunit2e-0653.9
NC_013440:3813132:3832106383210638333771272Haliangium ochraceum DSM 14365, complete genomerestriction modification system DNA specificity domain protein2e-0653.9
NC_011831:2213306:2212048221204822133191272Chloroflexus aggregans DSM 9485, complete genomerestriction modification system DNA specificity domain protein2e-0653.9
NC_013508:3188978:3232492323249232338171326Edwardsiella tarda EIB202, complete genometype I restriction modification DNA specificity domain protein2e-0653.9
NC_015136:2021799:2033188203318820345191332Burkholderia sp. CCGE1001 chromosome 1, complete sequencerestriction modification system DNA specificity domain-containing protein9e-0652