Pre_GI: BLASTP Hits

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Query: NC_002506:370629:414129 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Start: 414129, End: 414287, Length: 159

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:370471:413948413948414106159Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-23107
NC_012667:931390:971960971960972118159Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein2e-23107
NC_016945:370471:414457414457414615159Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-22103
NC_012667:931390:971451971451971609159Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein2e-22103
NC_012583:361241:423889423889424047159Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein2e-22103
NC_002506:370629:414638414638414796159Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein2e-22103
NC_016945:370471:389616389616389774159Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein3e-22103
NC_002506:370629:389797389797389955159Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein3e-22103
NC_012583:361241:401085401085401216132Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein5e-1786.3