Pre_GI: BLASTP Hits

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Query: NC_002506:324552:351085 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Start: 351085, End: 351393, Length: 309

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016446:49618:761517615176459309Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein1e-52204
NC_016446:49618:731987319873506309Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein7e-51198
NC_012583:361241:370648370648370920273Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein2e-45180
NC_012583:335000:348379348379348651273Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein1e-44177
NC_012580:301500:332186332186332458273Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein2e-43174
NC_012580:353273:353273353273353545273Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein2e-43174