Pre_GI: BLASTP Hits

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Query: NC_002506:324552:350396 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Start: 350396, End: 350974, Length: 579

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:324519:350213350213350791579Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein1e-95348
NC_016446:49618:754627546276040579Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein1e-95348
NC_012583:361241:369959369959370537579Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein1e-95348
NC_009456:787322:893405893405893983579Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein1e-95348
NC_009767:5464796:547321354732135473872660Roseiflexus castenholzii DSM 13941, complete genomehypothetical protein2e-31135
NC_015379:4249238:425803742580374258630594Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein5e-27120