Pre_GI: BLASTP Hits

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Query: NC_002506:324552:343518 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Start: 343518, End: 343886, Length: 369

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012667:931390:101783610178361018204369Vibrio cholerae MJ-1236 chromosome 2, complete genomeRelB protein8e-67251
NC_012667:931390:933475933475933843369Vibrio cholerae MJ-1236 chromosome 2, complete genomeDNA-damage-inducible protein J8e-67251
NC_012583:440420:462007462007462375369Vibrio cholerae O395 chromosome chromosome II, complete sequencerelB protein8e-67251
NC_009456:787322:801567801567801935369Vibrio cholerae O395 chromosome 1, complete sequenceCopG family transcriptional regulator8e-67251
NC_002506:370629:433310433310433678369Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completerelB protein8e-67251
NC_012580:301500:321520321520321840321Vibrio cholerae M66-2 chromosome II, complete sequencerelB protein2e-56217
NC_005140:340000:350458350458350901444Vibrio vulnificus YJ016 chromosome II, complete sequenceRelB protein1e-52204
NC_004603:1897532:193544719354471935800354Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeRelB protein2e-51200
NC_016446:119914:133851133851134135285Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeRelB protein3e-49193
NC_016446:49618:685836858368867285Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeDNA-damage-inducible protein J3e-49193
NC_016945:324519:343334343334343618285Vibrio cholerae IEC224 chromosome II, complete sequenceCopG family transcriptional regulator3e-49193
NC_016945:370471:433129433129433413285Vibrio cholerae IEC224 chromosome II, complete sequenceCopG family transcriptional regulator3e-49193
NC_017269:303500:329994329994330278285Vibrio cholerae LMA3984-4 chromosome II, complete sequenceDNA-damage-inducible protein J3e-49193
NC_014965:1428902:145588614558861456170285Vibrio vulnificus MO6-24/O chromosome I, complete sequenceDNA-damage-inducible protein J5e-44176
NC_014966:328056:336522336522336806285Vibrio vulnificus MO6-24/O chromosome II, complete sequenceDNA-damage-inducible protein J2e-43174
NC_004460:1618892:162622316262231626507285Vibrio vulnificus CMCP6 chromosome II, complete sequenceDNA-damage-inducible protein J2e-43174
NC_004603:1897532:192866619286661928950285Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeRelB protein/Vco27A protein7e-43172
NC_014618:4657719:467521146752114675498288Enterobacter cloacae SCF1 chromosome, complete genomeDNA-damage-inducible protein J2e-1270.9
NC_014500:894136:901693901693901977285Dickeya dadantii 3937 chromosome, complete genomeDNA-damage-inducible protein J7e-1269.3
NC_013592:2160000:217939821793982179685288Dickeya dadantii Ech586, complete genomeputative DNA-damage-inducible protein J2e-1064.3
NC_014500:1862000:189256518925651892849285Dickeya dadantii 3937 chromosome, complete genomeDNA-damage-inducible protein J3e-0857