Pre_GI: BLASTP Hits

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Query: NC_002506:324552:332490 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Start: 332490, End: 332978, Length: 489

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016446:49618:575555755558043489Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein9e-92335
NC_012580:353273:360947360947361435489Vibrio cholerae M66-2 chromosome II, complete sequenceOsmC-like protein9e-92335
NC_012580:301500:314221314221314709489Vibrio cholerae M66-2 chromosome II, complete sequenceOsmC-like protein9e-92335
NC_016945:324519:332478332478332945468Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein1e-87321
NC_016147:151224:156888156888157361474Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeOsmC family protein3e-44177
NC_014153:2125551:214442921444292144893465Thiomonas intermedia K12 chromosome, complete genomeOsmC family protein3e-43174
NC_008260:2992813:301116830111683011617450Alcanivorax borkumensis SK2, complete genomehypothetical protein1e-31135
NC_008786:3045770:306341430634143063857444Verminephrobacter eiseniae EF01-2, complete genomeOsmC family protein5e-26116
NC_018644:137755:149872149872150324453Alpha proteobacterium HIMB59 chromosome, complete genomeOsmC-like protein4e-24110
NC_013739:2057781:207148920714892071965477Conexibacter woesei DSM 14684, complete genomeOsmC family protein2e-1374.7
NC_014550:2091797:211285621128562113332477Arthrobacter arilaitensis Re117, complete genomeOsmC-like protein1e-1169.3
NC_017986:5421000:542567654256765426191516Pseudomonas putida ND6 chromosome, complete genomeOsmC family protein1e-1168.9
NC_009512:3118907:312985531298553130457603Pseudomonas putida F1, complete genomeOsmC family protein2e-1168.6
NC_012880:2480000:249763024976302498103474Dickeya dadantii Ech703, complete genomeOsmC family protein3e-1064.3
NC_015152:2887414:290957429095742910008435Spirochaeta sp. Buddy chromosome, complete genomeOsmC family protein3e-0961.2
NC_013850:3340882:334471433447143345187474Klebsiella variicola At-22 chromosome, complete genomeOsmC family protein3e-0754.7
NC_011283:3379181:338591333859133386386474Klebsiella pneumoniae 342 chromosome, complete genomeOsmC family protein5e-0753.5