Pre_GI: BLASTP Hits

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Query: NC_002506:324552:329437 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Start: 329437, End: 329580, Length: 144

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:370471:383147383147383470324Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-0858.2
NC_012583:361241:363380363380363703324Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein2e-0858.2
NC_009456:787322:900239900239900562324Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein2e-0858.2
NC_002506:370629:383328383328383651324Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein2e-0858.2
NC_009456:787322:863925863925864371447Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein3e-0753.9
NC_002506:370629:388283388283388729447Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein3e-0753.9
NC_012583:361241:399694399694400017324Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein3e-0753.9