Pre_GI: BLASTP Hits

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Query: NC_002506:324552:326882 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Start: 326882, End: 327046, Length: 165

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:370471:431777431777431941165Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-1168.2
NC_016945:324519:326849326849327013165Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-1168.2
NC_012667:931390:935031935031935195165Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein2e-1168.2
NC_012583:440420:460655460655460819165Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein2e-1168.2
NC_002506:370629:431958431958432122165Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein2e-1168.2
NC_017269:303500:328991328991329140150Vibrio cholerae LMA3984-4 chromosome II, complete sequencehypothetical protein1e-0858.5