Pre_GI: BLASTP Hits

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Query: NC_002506:298868:304670 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Start: 304670, End: 305200, Length: 531

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:300000:304637304637305167531Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein7e-97352
NC_016446:26500:311153111531645531Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein7e-97352
NC_012667:1045782:105514610551461055676531Vibrio cholerae MJ-1236 chromosome 2, complete genomeuropathogenic specific protein7e-97352
NC_012583:335000:339539339539340069531Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein7e-97352
NC_012580:301500:305869305869306399531Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein7e-97352
NC_008740:2989856:299294929929492993920972Marinobacter aquaeolei VT8, complete genomePAAR repeat-containing protein2e-26118
NC_012912:2901021:292103129210312921555525Dickeya zeae Ech1591, complete genomePAAR repeat-containing protein2e-26118
NC_020063:2077233:208292020829202083207288Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein1e-22105
NC_008563:1577879:158574915857491586033285Escherichia coli APEC O1, complete genomehypothetical protein1e-1995.5
NC_007946:1586656:159683015968301597114285Escherichia coli UTI89, complete genomehypothetical protein1e-1995.5
NC_011742:1528668:153884215388421539126285Escherichia coli S88 chromosome, complete genomehypothetical protein1e-1995.5
NC_008570:2014151:201937120193712019658288Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomepaar motif protein2e-1995.1
NC_011751:1714131:172057217205721720856285Escherichia coli UMN026 chromosome, complete genomehypothetical protein5e-1994
NC_004431:1713141:171606617160661716350285Escherichia coli CFT073, complete genomehypothetical protein1e-1892.8
NC_004431:1713141:172190617219061722190285Escherichia coli CFT073, complete genomehypothetical protein2e-1892
NC_014500:4691915:470598547059854706401417Dickeya dadantii 3937 chromosome, complete genomeUropathogenic specific protein7e-1683.2
NC_004547:1873390:1918143191814319198851743Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein6e-1477
NC_017068:1732857:173682017368201737170351Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein2e-1375.1
NC_004547:3817656:3837677383767738390501374Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative phospholipase3e-1271.2
NC_013421:553193:570426570426570692267Pectobacterium wasabiae WPP163, complete genomePAAR repeat-containing protein3e-1271.2
NC_010505:1205747:121966412196641219966303Methylobacterium radiotolerans JCM 2831, complete genomePAAR repeat-containing protein1e-1169.3
NC_005126:349658:3726773726773771044428Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein9e-0856.6
NC_007492:3655545:366747436674743668013540Pseudomonas fluorescens PfO-1, complete genomePAAR3e-0754.7
NC_014965:670115:6764996764996800413543Vibrio vulnificus MO6-24/O chromosome I, complete sequencemembrane protein3e-0754.7
NC_004459:1679335:1685633168563316891903558Vibrio vulnificus CMCP6 chromosome I, complete sequenceSuperfamily II DNA helicase3e-0754.7
NC_005139:2731623:2741159274115927441583000Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein3e-0754.7
NC_014733:1223359:124555012455501246419870Methylovorus sp. MP688 chromosome, complete genomepaar repeat-containing protein2e-0652.4
NC_012962:1068102:1105653110565311100084356Photorhabdus asymbiotica, complete genomehypothetical protein2e-0652
NC_002516:891000:899138899138899656519Pseudomonas aeruginosa PAO1, complete genomehypothetical protein2e-0651.6
NC_011770:4924127:496817449681744968692519Pseudomonas aeruginosa LESB58, complete genomehypothetical protein3e-0651.6
NC_014228:3442159:3447150344715034515804431Xenorhabdus nematophila ATCC 19061, complete genomeputative Rhs family protein3e-0651.6
NC_008463:4743296:475772047577204758238519Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein3e-0651.2