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Query: NC_002505:1507860 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 1507860, End: 1528843, Length: 20984

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013421:57961579617736519405Pectobacterium wasabiae WPP163, complete genome5e-20107BLASTN svgBLASTP svg
NC_008570:1986466*1986466201051824053Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_014500:89413689413693546441329Dickeya dadantii 3937 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014500:3097362*3097362318793090569Dickeya dadantii 3937 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007946:25874725874728282624080Escherichia coli UTI89, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008253:25705925705928215125093Escherichia coli 536, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008563:258725*25872528280524081Escherichia coli APEC O1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010498:1995500*1995500202472729228Escherichia coli SMS-3-5, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015559:27455702745570276476819199Marinomonas posidonica IVIA-Po-181 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004431:13529061352906137651123606Escherichia coli CFT073, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_002695:15713891571389159815826770Escherichia coli O157:H7 str. Sakai, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_002655:16559441655944168171125768Escherichia coli O157:H7 EDL933, complete genome1e-1179.8BLASTN svgBLASTP svg
AP010958:13057121305712133215626445Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011751:25683025683028052023691Escherichia coli UMN026 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015633:17020001702000172537323374Vibrio anguillarum 775 chromosome chromosome I, complete sequence6e-1073.8BLASTN svgBLASTP svg
NC_011751:13774571377457140058923133Escherichia coli UMN026 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008700:35147453514745354008625342Shewanella amazonensis SB2B, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013716:12989321298932132714328212Citrobacter rodentium ICC168, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014532:35960973596097363859942503Halomonas elongata DSM 2581, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008570:2014151*2014151204014925999Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008309:12893701289370131490625537Haemophilus somnus 129PT, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009349:78000*7800010171623717Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete2e-0765.9BLASTN svgBLASTP svg
NC_009792:4017510*4017510404823430725Citrobacter koseri ATCC BAA-895, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_012913:20741262074126209384819723Aggregatibacter aphrophilus NJ8700, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015424:35207833520783357390853126Aeromonas veronii B565 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_011149:11106421110642113231521674Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-0661.9BLASTN svgBLASTP svg
NC_002695:26123526123528377222538Escherichia coli O157:H7 str. Sakai, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_002655:26123626123628140820173Escherichia coli O157:H7 EDL933, complete genome2e-0661.9BLASTN svgBLASTP svg
CU928160:25693225693227863921708Escherichia coli IAI1 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg