Pre_GI: BLASTP Hits

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Query: NC_002505:860789:888846 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 888846, End: 889511, Length: 666

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:859492:885867885867886532666Vibrio cholerae IEC224 chromosome I, complete sequencetoxin co-regulated pilus biosynthesis protein P7e-129459
NC_016445:338288:366346366346367011666Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetoxin co-regulated pilus biosynthesis protein P7e-129459
NC_012668:2744393:277429327742932774958666Vibrio cholerae MJ-1236 chromosome 1, complete sequencetoxin co-regulated pilus biosynthesis protein P transcriptional activator of ToxT promoter7e-129459
NC_012578:818241:846298846298846963666Vibrio cholerae M66-2 chromosome I, complete sequencetoxin co-regulated pilus biosynthesis protein P7e-129459
NC_009457:351512:379581379581380246666Vibrio cholerae O395 chromosome 2, complete sequencetoxin co-regulated pilus biosynthesis protein P1e-126452
NC_012582:882931:911000911000911665666Vibrio cholerae O395 chromosome chromosome I, complete sequencetoxin co-regulated pilus biosynthesis protein P1e-126452
NC_010159:3448490:345833334583333459049717Yersinia pestis Angola, complete genome7e-0857.4
NC_003143:875367:884191884191884907717Yersinia pestis CO92, complete genomeputative regulatory membrane protein7e-0857.4
NC_008149:3373229:338205333820533382769717Yersinia pestis Nepal516, complete genomeregulatory membrane protein7e-0857.4
NC_014029:1146900:116901011690101169726717Yersinia pestis Z176003 chromosome, complete genomeputative regulatory membrane protein7e-0857.4
NC_017154:1089044:111115511111551111871717Yersinia pestis D106004 chromosome, complete genomeputative regulatory membrane protein7e-0857.4
NC_017160:1092839:111382711138271114543717Yersinia pestis D182038 chromosome, complete genomeputative regulatory membrane protein7e-0857.4
NC_017168:199381:220375220375221091717Yersinia pestis A1122 chromosome, complete genomeputative regulatory membrane protein7e-0857.4
NC_017265:1000342:102245510224551023171717Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative regulatory membrane protein7e-0857.4
NC_004088:3505383:351420735142073514911705Yersinia pestis KIM, complete genomehypothetical protein7e-0857.4
NC_008150:513783:535893535893536642750Yersinia pestis Antiqua, complete genomeputative regulatory membrane protein7e-0857.4
NC_010465:1118147:114095811409581141710753Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, CadC7e-0857.4
NC_006155:3596120:360502136050213605680660Yersinia pseudotuberculosis IP 32953, complete genomeputative regulatory membrane protein.9e-0857
NC_010634:3509880:351878135187813519440660Yersinia pseudotuberculosis PB1/+, complete genometranscriptional regulator, CadC9e-0857
NC_009708:1131500:115250211525021153161660Yersinia pseudotuberculosis IP 31758 chromosome, complete genometranscriptional regulator9e-0857