Pre_GI: BLASTP Hits

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Query: NC_002505:514732:537550 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 537550, End: 538284, Length: 735

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:514742:537558537558538292735Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein6e-138489
NC_016602:173314:185459185459186193735Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein6e-134476
NC_008782:841134:856530856530857519990Acidovorax sp. JS42, complete genomehypothetical protein4e-1891.7
NC_005139:2201820:227592522759252276623699Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein2e-1685.9
NC_016147:3349272:335426833542683355230963Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein8e-1477.4
NC_005139:796546:809140809140809859720Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein1e-1273.9
NC_012791:4794362:483328048332804834260981Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein1e-1170.1
NC_007908:3363902:3372013337201333730621050Rhodoferax ferrireducens T118, complete genometranscriptional factor3e-0652.4