Pre_GI: BLASTP Hits

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Query: NC_002505:2537655:2552249 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 2552249, End: 2552866, Length: 618

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:2588435:259854725985472599164618Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein6e-119426
NC_016445:2012294:202240620224062023023618Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein6e-119426
NC_012578:2479150:248926424892642489881618Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein6e-119426
NC_012582:2626786:263690026369002637517618Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein2e-118424
NC_008576:4701930:522052205909690Magnetococcus sp. MC-1, complete genomehypothetical protein2e-0858.9
NC_003047:536151:554710554710555357648Sinorhizobium meliloti 1021, complete genomehypothetical protein3e-0755.1
NC_016832:3858815:387292638729263873522597Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-0651.2
NC_003198:3881221:389863938986393899235597Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-0651.2