Pre_GI: BLASTP Hits

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Query: NC_002505:238569:241437 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 241437, End: 242636, Length: 1200

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017270:220282:2244302244302256291200Vibrio cholerae LMA3984-4 chromosome chromosome I, completeO-antigen ligase0663
NC_016944:238580:2414482414482426471200Vibrio cholerae IEC224 chromosome I, complete sequenceO-antigen ligase0663
NC_016445:2663837:2666705266670526679041200Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeO-antigen ligase0663
NC_012668:368305:3963503963503975491200Vibrio cholerae MJ-1236 chromosome 1, complete sequenceO-antigen ligase0663
NC_012578:224559:2274272274272286261200Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein0663
NC_009457:2764972:2767840276784027690391200Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein0661
NC_012582:272320:2751882751882763871200Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein0661
NC_015633:413587:4232514232514244891239Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein2e-82306
NC_013959:2892660:2891386289138628926631278Sideroxydans lithotrophicus ES-1 chromosome, complete genomeO-antigen polymerase1e-0964.7
NC_016602:103878:1514641514641525491086Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceO-antigen ligase3e-0653.5