Pre_GI: BLASTP Hits

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Query: NC_002505:1931750:1948112 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 1948112, End: 1948573, Length: 462

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:1363831:141951314195131419974462Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein2e-87320
NC_010278:1045884:105689110568911057199309Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein2e-0651.6
NC_016944:1978058:199442019944201994881462Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein2e-87320
NC_013416:1783349:179407817940781794410333Aggregatibacter actinomycetemcomitans D11S-1, complete genomehypothetical protein2e-0961.2
NC_009457:1444449:150121515012151501676462Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein2e-87320
NC_012582:2013515:203263420326342033095462Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein2e-87320
NC_009053:1081651:109265610926561092964309Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein2e-0651.6