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Query: NC_002505:1931750:1944387 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 1944387, End: 1946144, Length: 1758

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:1978058:1990695199069519924521758Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein01225
NC_016445:1363831:1415788141578814175451758Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein01225
NC_012668:1688500:1701363170136317031201758Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein01225
NC_012582:2013515:2028909202890920306661758Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein01222
NC_009457:1444449:1497490149749014992471758Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein01222
NC_011750:1978801:2007191200719120089601770Escherichia coli IAI39 chromosome, complete genomehypothetical protein8e-91335
NC_017511:602000:6039846039846057501767Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative phage associated protein8e-80298
NC_002927:3827211:3862724386272438644991776Bordetella bronchiseptica RB50, complete genomehypothetical protein8e-79295
NC_018604:305957:3279003279003296091710Brachyspira pilosicoli WesB complete genomeIntegrase catalytic region4e-57223
NC_017243:58000:7472174721764451725Brachyspira intermedia PWS/A chromosome, complete genomeintegrase catalytic subunit1e-55218
NC_019771:2461000:2474662247466224763231662Anabaena cylindrica PCC 7122, complete genomeIntegrase catalytic region2e-0654.3
NC_019774:74131:8167681676833371662Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequenceIntegrase catalytic region3e-0653.9