Pre_GI: BLASTP Hits

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Query: NC_002505:1931750:1941658 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 1941658, End: 1942032, Length: 375

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:1978058:198796619879661988340375Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein1e-67254
NC_016445:1363831:141305914130591413433375Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-67254
NC_012668:1688500:170547517054751705849375Vibrio cholerae MJ-1236 chromosome 1, complete sequencemiddle operon regulator-related protein1e-67254
NC_012582:2013515:202618020261802026554375Vibrio cholerae O395 chromosome chromosome I, complete sequencemiddle operon regulator-related protein1e-67254
NC_009457:1444449:149476114947611495135375Vibrio cholerae O395 chromosome 2, complete sequencetranscriptional regulator1e-67254
NC_015172:3160249:318927531892753189604330Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeMor transcription activator domain protein3e-0650.4
NC_015172:2628128:266052826605282660857330Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeMor transcription activator domain protein3e-0650.4
NC_015172:2986867:301505530150553015384330Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeMor transcription activator domain protein3e-0650.4
NC_015172:515557:529349529349529678330Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeMor transcription activator domain protein3e-0650.4