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Query: NC_002505:1931750:1940322 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 1940322, End: 1940699, Length: 378

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:1688500:170680817068081707185378Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein6e-67251
NC_012582:2013515:202484420248442025221378Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein6e-67251
NC_009457:1444449:149342514934251493802378Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein6e-67251
NC_016944:1978058:198663019866301987001372Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein1e-65247
NC_016445:1363831:141172314117231412094372Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-65247