Pre_GI: BLASTP Hits

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Query: NC_002505:1892430:1901450 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 1901450, End: 1902901, Length: 1452

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:1937645:1947758194775819492091452Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein0995
NC_016445:1363831:1372850137285013743011452Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein0995
NC_012668:1688500:1744607174460717460581452Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein0995
NC_012578:1838470:1848583184858318500341452Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein0995
NC_012582:1976962:1985972198597219874231452Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein0990
NC_009457:1444449:1454553145455314560041452Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein0990
NC_008577:4533574:4547669454766945490961428Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein6e-109394
NC_007645:3756654:3765522376552237670031482Hahella chejuensis KCTC 2396, complete genomehypothetical protein2e-66253
NC_009656:6224221:6235525623552562374711947Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein5e-51202
NC_009434:1580205:158396815839681584459492Pseudomonas stutzeri A1501, complete genomehypothetical protein2e-30134
NC_015588:939037:9390379390379405811545Isoptericola variabilis 225 chromosome, complete genomehypothetical protein7e-29129
NC_009434:1580205:1586969158696915882191251Pseudomonas stutzeri A1501, complete genomehypothetical protein3e-0860.5