Pre_GI: BLASTP Hits

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Query: NC_002505:1550108:1580555 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 1580555, End: 1582123, Length: 1569

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:1547176:1577581157758115791491569Vibrio cholerae IEC224 chromosome I, complete sequenceplasmid replication protein Cri01068
NC_016944:1547176:1572730157273015742981569Vibrio cholerae IEC224 chromosome I, complete sequenceplasmid replication protein Cri01068
NC_002505:1550108:1575704157570415772721569Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completephage replication protein Cri01068
NC_016445:1027143:1052704105270410542691566Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completephage replication protein Cri01060
NC_009052:2512373:2536208253620825378601653Shewanella baltica OS155, complete genomephage/plasmid replication protein, gene II/X family2e-87323
NC_016628:193000:2120392120392133341296Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceG II protein5e-61235
NC_016628:193000:2073482073482086431296Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceG II protein5e-61235
NC_016602:1994110:2002078200207820033731296Vibrio furnissii NCTC 11218 chromosome 1, complete sequencephage replication protein Cri5e-61235