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Query: NC_002488:2657274 Xylella fastidiosa 9a5c, complete genome

Start: 2657274, End: 2686499, Length: 29226

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a pathogenic strain (8.1b) isolated in 1992 in France that had come from infected twigs derived from the sweet orange strain Valencia in Brazil in the same year. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. Xylella fastidiosa is similar to Xanthomonas campestris pv. campestris in that it produces a wide variety of pathogenic factors for colonization in a host-specific manner including a large number of fimbrial and afimbrial adhesins for attachment. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010577:2513241*2513241254349930259Xylella fastidiosa M23, complete genome014710BLASTN svgBLASTP svg
NC_002488:111809918099Xylella fastidiosa 9a5c, complete genome013930BLASTN svgBLASTP svg
NC_004556:2495712*2495712251907123360Xylella fastidiosa Temecula1, complete genome010710BLASTN svgBLASTP svg
NC_010577:111809918099Xylella fastidiosa M23, complete genome09190BLASTN svgBLASTP svg
NC_004556:111809918099Xylella fastidiosa Temecula1, complete genome09190BLASTN svgBLASTP svg
NC_002488:2070975*2070975208947618502Xylella fastidiosa 9a5c, complete genome04877BLASTN svgBLASTP svg
NC_004556:14420001442000145968117682Xylella fastidiosa Temecula1, complete genome03998BLASTN svgBLASTP svg
NC_002488:84237784237786661724241Xylella fastidiosa 9a5c, complete genome03794BLASTN svgBLASTP svg
NC_010577:1456909*1456909148269825790Xylella fastidiosa M23, complete genome03529BLASTN svgBLASTP svg
NC_010577:11884381188438121515026713Xylella fastidiosa M23, complete genome02771BLASTN svgBLASTP svg
NC_004556:20780002078000210180823809Xylella fastidiosa Temecula1, complete genome02726BLASTN svgBLASTP svg
NC_004556:11788971178897120511726221Xylella fastidiosa Temecula1, complete genome02700BLASTN svgBLASTP svg
NC_010577:20932612093261211764024380Xylella fastidiosa M23, complete genome02611BLASTN svgBLASTP svg
NC_008344:1*13873538735Nitrosomonas eutropha C91, complete genome4e-24121BLASTN svgBLASTP svg
NC_012792:10916691091669111509923431Variovorax paradoxus S110 chromosome 2, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_012791:4736084*4736084478464848565Variovorax paradoxus S110 chromosome 1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007498:3655304*3655304367749922196Pelobacter carbinolicus DSM 2380, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_007947:48582848582850833122504Methylobacillus flagellatus KT, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007929:1805000*1805000183399929000Lactobacillus salivarius subsp. salivarius UCC118, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_008313:113975239752Ralstonia eutropha H16 chromosome 1, complete sequence9e-1073.8BLASTN svgBLASTP svg
NC_014752:83461683461687970445089Neisseria lactamica ST-640, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_020291:1*12890828908Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome9e-1073.8BLASTN svgBLASTP svg
NC_018664:1*12406624066Clostridium acidurici 9a chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_016002:111459914599Pseudogulbenkiania sp. NH8B, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_014378:525717*52571755155125835Acetohalobium arabaticum DSM 5501 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010723:1*11759917599Clostridium botulinum E3 str. Alaska E43, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_008825:4025705*4025705405199926295Methylibium petroleiphilum PM1, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_008593:2527064*2527064255549928436Clostridium novyi NT, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_012560:5338707*5338707537299934293Azotobacter vinelandii DJ, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_014733:2851984*2851984287799926016Methylovorus sp. MP688 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_021150:5298500*5298500533099932500Azotobacter vinelandii CA6, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010717:47877504787750482298935240Xanthomonas oryzae pv. oryzae PXO99A, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010611:3879190*3879190390849929310Acinetobacter baumannii ACICU, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005085:111651116511Chromobacterium violaceum ATCC 12472, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004557:32094*320945657224479Clostridium tetani E88, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004129:195347*19534722067225326Pseudomonas fluorescens Pf-5, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_010501:111882518825Pseudomonas putida W619, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_010681:111969219692Burkholderia phytofirmans PsJN chromosome 1, complete sequence9e-0763.9BLASTN svgBLASTP svg
NC_012563:1*11946419464Clostridium botulinum A2 str. Kyoto, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010520:1*11926119261Clostridium botulinum A3 str. Loch Maree, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010516:1*11931119311Clostridium botulinum B1 str. Okra, complete genome3e-0661.9BLASTN svgBLASTP svg