Pre_GI: BLASTP Hits

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Query: NC_001263:72681:93152 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 93152, End: 94687, Length: 1536

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008025:2407618:2428786242878624303301545Deinococcus geothermalis DSM 11300, complete genomeFAD dependent oxidoreductase0891
NC_010175:1825878:1843901184390118455621662Chloroflexus aurantiacus J-10-fl, complete genomeFAD dependent oxidoreductase3e-124445
NC_012032:1827244:1845267184526718469281662Chloroflexus sp. Y-400-fl, complete genomeFAD dependent oxidoreductase3e-124445
NC_011729:4073761:4074417407441740760601644Cyanothece sp. PCC 7424 chromosome, complete genomeFAD dependent oxidoreductase5e-77288
NC_011729:812594:8125948125948142851692Cyanothece sp. PCC 7424 chromosome, complete genomeFAD dependent oxidoreductase2e-67257
NC_014217:3024961:3029462302946230310571596Starkeya novella DSM 506 chromosome, complete genomethiamine biosynthesis Thi4 protein5e-43176
NC_015738:220000:2201282201282217051578Eggerthella sp. YY7918, complete genomehypothetical protein5e-41169
NC_009921:3455783:3470487347048734720401554Frankia sp. EAN1pec, complete genomeFAD dependent oxidoreductase1e-38161
NC_015976:2187377:2204338220433822059001563Sphingobium sp. SYK-6, complete genomehypothetical protein2e-38160
NC_008595:5234467:5239881523988152415901710Mycobacterium avium 104, complete genomeputative dehydrogenase4e-37156
NC_016948:1796989:1798731179873118004791749Mycobacterium intracellulare MOTT-64 chromosome, complete genomeputative dehydrogenase2e-36154
NC_017904:1763015:1769653176965317712991647Mycobacterium sp. MOTT36Y chromosome, complete genomedehydrogenase9e-36151
NC_017904:1831071:1850737185073718524431707Mycobacterium sp. MOTT36Y chromosome, complete genomedehydrogenase2e-35150
NC_017506:1:1905619056209001845Marinobacter adhaerens HP15 chromosome, complete genomeFAD-dependent oxidoreductase9e-35148
NC_008786:2175064:2202979220297922045501572Verminephrobacter eiseniae EF01-2, complete genomeFAD dependent oxidoreductase6e-34145
NC_015723:2550000:2557970255797025595681599Cupriavidus necator N-1 chromosome 2, complete sequenceFAD dependent oxidoreductase1e-29131
NC_015138:3809732:3809732380973238113391608Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeamine oxidase1e-24115
NC_013235:4045589:4049483404948340510631581Nakamurella multipartita DSM 44233, complete genomeFAD dependent oxidoreductase1e-24114
NC_014221:1167261:1184227118422711857081482Truepera radiovictrix DSM 17093 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein3e-23110
NC_008578:2206500:2218377221837722200591683Acidothermus cellulolyticus 11B, complete genomeFAD dependent oxidoreductase4e-23109
NC_010407:1114408:1128790112879011302381449Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative oxidoreductase4e-23110
NC_012918:1444333:1476184147618414776081425Geobacter sp. M21 chromosome, complete genomeFAD dependent oxidoreductase6e-23108
NC_015064:1021483:1021483102148310230391557Acidobacterium sp. MP5ACTX9 chromosome, complete genomephytoene desaturase7e-22105
NC_014958:2614399:2637252263725226393542103Deinococcus maricopensis DSM 21211 chromosome, complete genomeamine oxidase3e-20100
NC_009380:1491428:1495977149597714975721596Salinispora tropica CNB-440 chromosome, complete genomeFAD dependent oxidoreductase9e-2099
NC_013729:2157785:2181082218108221826351554Kribbella flavida DSM 17836, complete genomeamine oxidase5e-1892.8
NC_007776:1340741:1359648135964813612041557Synechococcus sp. JA-2-3B'a(2-13), complete genomecarotenoid isomerase7e-1892.4
NC_005071:1111605:1131223113122311327851563Prochlorococcus marinus str. MIT 9313, complete genomeputative carotenoid isomerase3e-1790.5
NC_015161:1748236:1770077177007717715821506Deinococcus proteolyticus MRP chromosome, complete genomeFAD dependent oxidoreductase4e-1686.7
NC_010296:1081728:1081728108172810832391512Microcystis aeruginosa NIES-843, complete genomecarotene isomerase4e-1686.7
NC_014643:1123601:1135030113503011364391410Rothia dentocariosa ATCC 17931 chromosome, complete genomemetal-dependent hydrolase family protein2e-1481.3
NC_016593:1814500:1832956183295618344521497Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein2e-1480.9
NC_019940:3267436:3293093329309332946221530Thioflavicoccus mobilis 8321 chromosome, complete genomephytoene desaturase7e-1479.3
NC_014623:1074299:1076428107642810779991572Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephytoene dehydrogenase4e-1376.6
NC_007643:578808:5788085788085803311524Rhodospirillum rubrum ATCC 11170, complete genomePhytoene desaturase4e-1376.6
NC_014623:8648000:8660960866096086625101551Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephytoene desaturase8e-1375.9
NC_003276:252217:2728362728362743351500Nostoc sp. PCC 7120 plasmid pCC7120alpha, complete sequencezeta-carotene desaturase2e-1274.7
NC_013093:1909305:1932807193280719343991593Actinosynnema mirum DSM 43827, complete genomeamine oxidase5e-1273.2
NC_014297:1100997:1100997110099711025291533Halalkalicoccus jeotgali B3 chromosome, complete genomephytoene desaturase4e-1169.7
NC_007777:3824291:3843204384320438447511548Frankia sp. CcI3, complete genomeFAD dependent oxidoreductase4e-1066.6
NC_005125:2269343:2284271228427122857821512Gloeobacter violaceus PCC 7421, complete genomehypothetical protein7e-1065.9
NC_010723:622928:6248046248046263031500Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein1e-0965.5
NC_010794:2071858:2080718208071820823371620Methylacidiphilum infernorum V4, complete genomePhytoene dehydrogenase or related enzyme1e-0965.5
NC_010674:658596:6595986595986610971500Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein2e-0964.7
NC_014829:4293583:4310703431070343121661464Bacillus cellulosilyticus DSM 2522 chromosome, complete genomephytoene desaturase3e-0963.5
NC_014387:3227875:3234667323466732362321566Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeFAD dependent oxidoreductase5e-0859.7
NC_016786:54000:5501255012564271416Corynebacterium diphtheriae HC01 chromosome, complete genomedehydrogenase6e-0859.3
NC_015978:1266196:1274164127416412753601197Lactobacillus sanfranciscensis TMW 1.1304 chromosome, complete8e-0755.8
NC_013159:2832552:2848601284860128501241524Saccharomonospora viridis DSM 43017, complete genomeUDP-galactopyranose mutase2e-0654.3
NC_013159:2832552:2834396283439628358291434Saccharomonospora viridis DSM 43017, complete genomephytoene dehydrogenase-like oxidoreductase4e-0653.5