Pre_GI: BLASTP Hits

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Query: NC_001263:72681:89343 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 89343, End: 90140, Length: 798

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012779:2586175:260560826056082606294687Edwardsiella ictaluri 93-146, complete genome3-oxoacyl-[acyl-carrier-protein] reductase5e-1065.1
NC_010002:661696:676363676363677124762Delftia acidovorans SPH-1, complete genomeshort-chain dehydrogenase/reductase SDR2e-0859.7
NC_016147:2820232:283924428392442840023780Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR5e-0858.5
NC_014829:1526401:152798215279821528860879Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR5e-0858.5
NC_007645:2628423:262842326284232629178756Hahella chejuensis KCTC 2396, complete genomeshort-chain alcohol dehydrogenase-like protein5e-0858.2
NC_014006:1862000:187711418771141877884771Sphingobium japonicum UT26S chromosome 1, complete genomegluconate 5-dehydrogenase6e-0858.2
NC_007503:1047577:105639410563941057140747Carboxydothermus hydrogenoformans Z-2901, complete genomeoxidoreductase, short chain dehydrogenase/reductase family1e-0757
NC_010410:480518:497841497841498767927Acinetobacter baumannii AYE, complete genomeputative dehydrogenase2e-0756.2
NC_010611:3413333:341494934149493415851903Acinetobacter baumannii ACICU, complete genomeDehydrogenase with different specificities2e-0756.2
NC_009848:1542978:154551815455181546261744Bacillus pumilus SAFR-032, complete genome3-oxoacyl-[acyl-carrier-protein] reductase2e-0756.2
NC_008148:1859888:189114318911431891940798Rubrobacter xylanophilus DSM 9941, complete genomeshort-chain dehydrogenase/reductase SDR3e-0755.8
NC_013730:4502965:450463045046304505382753Spirosoma linguale DSM 74, complete genomeshort-chain dehydrogenase/reductase SDR4e-0755.5
NC_014479:509919:523624523624524343720Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeshort chain dehydrogenase/reductase family oxidoreductase5e-0755.1
NC_010002:661696:675629675629676366738Delftia acidovorans SPH-1, complete genomeshort-chain dehydrogenase/reductase SDR7e-0754.7
NC_008343:88184:103129103129104037909Granulibacter bethesdensis CGDNIH1, complete genomeshort chain dehydrogenase8e-0754.3
NC_018664:1699618:171096517109651711702738Clostridium acidurici 9a chromosome, complete genome3-oxoacyl-[acyl-carrier-protein] reductase FabG1e-0653.5
NC_017190:2002718:200648720064872007203717Bacillus amyloliquefaciens LL3 chromosome, complete genomeoxido-reductase2e-0653.1
NC_014551:2057971:206172520617252062441717Bacillus amyloliquefaciens DSM 7, complete genomeoxido-reductase2e-0653.1
NC_009338:2042664:204266420426642043518855Mycobacterium gilvum PYR-GCK chromosome, complete genomeshort-chain dehydrogenase/reductase SDR2e-0653.1
NC_010581:3387118:3397876339787633988861011Beijerinckia indica subsp. indica ATCC 9039, complete genomeshort-chain dehydrogenase/reductase SDR2e-0653.1
NC_003909:3606177:364167236416723642412741Bacillus cereus ATCC 10987, complete genome3-ketoacyl-(acyl-carrier-protein) reductase4e-0652.4
NC_007530:3616828:366639836663983667138741Bacillus anthracis str. 'Ames Ancestor', complete genome3-ketoacyl-(acyl-carrier-protein) reductase4e-0652
NC_012472:3705500:371377537137753714515741Bacillus cereus 03BB102, complete genome3-oxoacyl-[acyl-carrier-protein] reductase4e-0652
NC_003997:3617000:366627136662713667011741Bacillus anthracis str. Ames, complete genome3-ketoacyl-(acyl-carrier-protein) reductase4e-0652
NC_006274:3736703:374682937468293747569741Bacillus cereus E33L, complete genome3-ketoacyl-(acyl-carrier-protein) reductase4e-0652
NC_008600:3686135:369576936957693696509741Bacillus thuringiensis str. Al Hakam, complete genome3-oxoacyl-[acyl-carrier protein] reductase 1 (3-ketoacyl-acyl carrier protein reductase 1)4e-0652
NC_016935:3819500:385895238589523859734783Paenibacillus mucilaginosus 3016 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR5e-0652
NC_005945:3636321:366696636669663667706741Bacillus anthracis str. Sterne, complete genome3-ketoacyl-(acyl-carrier-protein) reductase4e-0652
NC_014335:3589726:361712736171273617867741Bacillus cereus biovar anthracis str. CI chromosome, complete3-ketoacyl-(acyl-carrier-protein) reductase4e-0652
NC_005957:3665657:368794536879453688685741Bacillus thuringiensis serovar konkukian str. 97-27, complete3-ketoacyl-(acyl-carrier-protein) reductase4e-0652
NC_011773:3689473:370116237011623701902741Bacillus cereus AH820 chromosome, complete genome3-ketoacyl-ACP reductase4e-0652
NC_012581:559182:571548571548572288741Bacillus anthracis str. CDC 684 chromosome, complete genome3-ketoacyl-ACP reductase4e-0652
NC_012659:3617000:366629836662983667038741Bacillus anthracis str. A0248, complete genome3-ketoacyl-ACP reductase4e-0652
NC_010625:1415500:144668114466811447457777Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceshort-chain dehydrogenase/reductase SDR4e-0652
NC_010382:1607013:161174116117411612487747Lysinibacillus sphaericus C3-41, complete genome3-oxoacyl-(acyl-carrier protein) reductase4e-0652
NC_006905:4638707:464115046411504641914765Salmonella enterica subsp. enterica serovar Choleraesuis strgluconate 5-dehydrogenase6e-0651.6
NC_012125:4716000:471846447184644719228765Salmonella enterica subsp. enterica serovar Paratyphi C straingluconate 5-dehydrogenase6e-0651.6
NC_013524:1150725:115384311538431154631789Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeshort-chain dehydrogenase/reductase SDR5e-0651.6
NC_016631:4423658:442585244258524426658807Granulicella mallensis MP5ACTX8 chromosome, complete genomegluconate 5-dehydrogenase5e-0651.6
NC_016109:8664974:868784086878408688637798Kitasatospora setae KM-6054, complete genomeputative oxidoreductase7e-0651.2
NC_016109:62000:946429464295439798Kitasatospora setae KM-6054, complete genomeputative oxidoreductase7e-0651.2
NC_014315:1435243:144319514431951444055861Nitrosococcus watsoni C-113 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR7e-0651.2
NC_016935:1868839:189275218927521893489738Paenibacillus mucilaginosus 3016 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR7e-0651.2
NC_008228:372520:374405374405375277873Pseudoalteromonas atlantica T6c, complete genomeshort-chain dehydrogenase/reductase SDR8e-0651.2