Pre_GI: BLASTP Hits

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Query: NC_001263:72681:88873 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 88873, End: 89346, Length: 474

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011586:268927:329924329924330382459Acinetobacter baumannii AB0057 chromosome, complete genometranscriptional regulator NrdR1e-1582.4
NC_010611:240839:267663267663268121459Acinetobacter baumannii ACICU, complete genomepredicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains1e-1582.4
NC_017171:280762:297517297517297975459Acinetobacter baumannii MDR-ZJ06 chromosome, complete genometranscriptional regulator NrdR1e-1582.4
NC_011772:4487378:451207245120724512533462Bacillus cereus G9842, complete genometranscriptional regulator, NrdR family3e-27120
NC_008060:341851:360745360745361224480Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceRibonucleotide reductase regulator NrdR-like3e-1787.4
NC_002620:803696:818797818797819255459Chlamydia muridarum Nigg, complete genomehypothetical protein6e-1476.6
NC_010287:769600:783553783553784017465Chlamydia trachomatis 434/Bu, complete genometranscriptional repressor1e-1375.9
NC_017431:451551:465504465504465968465Chlamydia trachomatis E/11023 chromosome, complete genometranscriptional regulator NrdR1e-1375.9
NC_017439:451535:465488465488465952465Chlamydia trachomatis E/150 chromosome, complete genometranscriptional regulator NrdR1e-1375.9
NC_010280:769639:783592783592784056465Chlamydia trachomatis L2b/UCH-1/proctitis, complete genometranscriptional repressor1e-1375.9
NC_015744:769907:783262783262783726465Chlamydia trachomatis L2c chromosome, complete genometranscriptional regulator NrdR1e-1375.9
NC_020291:1389114:139449013944901394939450Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional repressor NrdR4e-25113
NC_015737:2691246:271856927185692719033465Clostridium sp. SY8519, complete genomehypothetical protein9e-24108
NC_016782:1385800:143374714337471434202456Corynebacterium diphtheriae 241 chromosome, complete genometranscriptional regulator NrdR2e-1994.7
NC_016799:1439000:148555514855551486010456Corynebacterium diphtheriae 31A chromosome, complete genometranscriptional regulator NrdR2e-1994.7
NC_016800:1411000:146188614618861462341456Corynebacterium diphtheriae BH8 chromosome, complete genometranscriptional regulator NrdR2e-1994.7
NC_016801:1422500:147553514755351475990456Corynebacterium diphtheriae C7 (beta) chromosome, complete genometranscriptional regulator NrdR2e-1994.7
NC_016785:1407892:141189914118991412354456Corynebacterium diphtheriae CDCE 8392 chromosome, complete genometranscriptional regulator NrdR2e-1994.7
NC_016786:1359064:143401214340121434467456Corynebacterium diphtheriae HC01 chromosome, complete genometranscriptional regulator NrdR2e-1994.7
NC_016802:1317365:141853514185351418990456Corynebacterium diphtheriae HC02 chromosome, complete genometranscriptional regulator NrdR2e-1994.7
NC_016788:1376000:142878814287881429243456Corynebacterium diphtheriae HC04 chromosome, complete genometranscriptional regulator NrdR2e-1994.7
NC_016783:1397975:145433914543391454794456Corynebacterium diphtheriae INCA 402 chromosome, complete genometranscriptional regulator NrdR2e-1994.7
NC_002935:1378566:144540414454041445859456Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein2e-1994.7
NC_016789:1432000:147924714792471479702456Corynebacterium diphtheriae PW8 chromosome, complete genometranscriptional regulator NrdR2e-1994.7
NC_017300:1326331:134116413411641341619456Corynebacterium pseudotuberculosis 1002 chromosome, completeNrdR family transcriptional regulator1e-1892
NC_016932:1309644:132847513284751328930456Corynebacterium pseudotuberculosis 316 chromosome, complete genomeNrdR family transcriptional regulator1e-1892
NC_017301:1328500:134347013434701343925456Corynebacterium pseudotuberculosis C231 chromosome, completeNrdR family transcriptional regulator1e-1892
NC_014329:1328949:134378213437821344237456Corynebacterium pseudotuberculosis FRC41 chromosome, completeNrdR family transcriptional regulator1e-1892
NC_017303:1328777:134361113436111344066456Corynebacterium pseudotuberculosis I19 chromosome, complete genomeNrdR family transcriptional regulator1e-1892
NC_017031:1328500:134358813435881344043456Corynebacterium pseudotuberculosis P54B96 chromosome, completeNrdR family transcriptional regulator1e-1892
NC_017305:1326351:134118113411811341636456Corynebacterium pseudotuberculosis PAT10 chromosome, completeNrdR family transcriptional regulator1e-1892
NC_017317:1463466:147834014783401478795456Corynebacterium ulcerans 809 chromosome, complete genomeNrdR-family transcription regulator1e-1892
NC_015683:1467000:148205514820551482510456Corynebacterium ulcerans BR-AD22 chromosome, complete genomeNrdR family transcription regulator1e-1892
NC_015726:2817352:283987328398732840340468Cupriavidus necator N-1 chromosome 1, complete sequencetranscriptional regulator NrdR3e-1684.3
NC_011726:3205278:321380732138073214346540Cyanothece sp. PCC 8801, complete genomeATP-cone domain protein3e-23107
NC_013161:3071105:308359830835983084137540Cyanothece sp. PCC 8802, complete genomeATP-cone domain protein3e-23107
NC_018866:1706000:172525117252511725709459Dehalobacter sp. DCA chromosome, complete genomeRibonucleotide reductase transcriptional regulator NrdR2e-24111
NC_008309:1155218:115856111585611159010450Haemophilus somnus 129PT, complete genomehypothetical protein1e-1892
NC_013201:145973:158243158243158731489Halomicrobium mukohataei DSM 12286 plasmid pHmuk01, completeATP-cone domain protein3e-1787.8
NC_014532:3036109:304491630449163045401486Halomonas elongata DSM 2581, complete genomeK07738 ATP-cone domain protein8e-1682.8
NC_013422:2004478:200562820056282006155528Halothiobacillus neapolitanus c2, complete genomeATP-cone domain protein1e-1892
NC_014830:1602198:160632316063231606820498Intrasporangium calvum DSM 43043 chromosome, complete genomeATP-cone domain protein2e-1994.4
NC_013169:1759900:178074417807441781244501Kytococcus sedentarius DSM 20547, complete genometranscriptional regulator NrdR1e-1995.5
NC_009004:1770497:179123417912341791680447Lactococcus lactis subsp. cremoris MG1363, complete genomeputative regulatory protein2e-1788.2
NC_007626:2204767:225401322540132254474462Magnetospirillum magneticum AMB-1, complete genomePredicted transcriptional regulator9e-2095.9
NC_007626:959684:987311987311987772462Magnetospirillum magneticum AMB-1, complete genomePredicted transcriptional regulator9e-2095.9
NC_011666:2259447:228270922827092283239531Methylocella silvestris BL2, complete genomeATP-cone domain protein6e-2199.8
NC_012914:1824955:182593118259311826398468Paenibacillus sp. JDR-2, complete genomeATP-cone domain protein6e-24109
NC_007498:1666242:168959116895911690064474Pelobacter carbinolicus DSM 2380, complete genomeconserved hypothetical protein TIGR002444e-1890.5
NC_008781:3056407:306356330635633064012450Polaromonas naphthalenivorans CJ2, complete genomeATP-cone domain protein6e-1476.3
NC_007973:2888824:291455529145552915022468Ralstonia metallidurans CH34 chromosome 1, complete sequenceProtein of unknown function DUF1933e-1684.3
NC_012856:737170:754184754184754648465Ralstonia pickettii 12D chromosome 1, complete genomeATP-cone domain protein4e-1477
NC_010682:701912:716349716349716813465Ralstonia pickettii 12J chromosome 1, complete sequenceATP-cone domain protein4e-1477
NC_014311:2733897:274043727404372740886450Ralstonia solanacearum PSI07 chromosome, complete genomeNrdR family transcriptional regulator5e-1477
NC_011369:1135592:118986511898651190341477Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeNrdR family transcriptional regulator9e-2199
NC_007912:4396972:439996043999604400514555Saccharophagus degradans 2-40, complete genomeprotein of unknown function DUF1936e-2096.3
NC_014484:762710:768939768939769412474Spirochaeta thermophila DSM 6192 chromosome, complete genometranscriptional regulatory protein2e-2098.2
NC_008319:478499:514273514273514749477Synechococcus sp. CC9311, complete genometranscriptional regulator, NrdR family protein1e-22105
NC_014220:837926:844305844305844778474Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeATP-cone domain protein5e-25113
NC_019902:2943719:296553429655342966067534Thioalkalivibrio nitratireducens DSM 14787, complete genomeRibonucleotide reductase transcriptional regulator NrdR1e-1582.4
NC_015385:1122794:112836711283671128825459Treponema succinifaciens DSM 2489 chromosome, complete genomeTranscriptional repressor nrdR1e-22105
NC_008312:7169309:717267671726767173203528Trichodesmium erythraeum IMS101, complete genomeRibonucleotide reductase regulator NrdR-like4e-22103