Pre_GI: BLASTP Hits

Some Help

Query: NC_001263:72681:81769 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 81769, End: 82482, Length: 714

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014221:3137952:315387331538733154697825Truepera radiovictrix DSM 17093 chromosome, complete genomeLmbE family protein1e-32140
NC_006582:2205154:222399422239942224662669Bacillus clausii KSM-K16, complete genomehypothetical protein2e-1995.9
NC_016023:1501553:150608315060831506766684Bacillus coagulans 36D1 chromosome, complete genomeLmbE family protein3e-1789
NC_015634:2933712:295056029505602951243684Bacillus coagulans 2-6 chromosome, complete genomeLmbE family protein3e-1789
NC_007168:2415361:241875924187592419424666Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein7e-1684.3
NC_002952:610462:627340627340628005666Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein1e-1583.6
NC_017347:616000:636154636154636819666Staphylococcus aureus subsp. aureus T0131 chromosome, completeGlcNAc-PI de-N-acetylase1e-1583.2
NC_017341:618649:640046640046640711666Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,GlcNAc-PI de-N-acetylase1e-1583.2
NC_009641:597000:617097617097617762666Staphylococcus aureus subsp. aureus str. Newman chromosome,hypothetical protein1e-1583.2
NC_007795:541783:559532559532560197666Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein1e-1583.2
NC_002953:588437:609940609940610605666Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein2e-1582.8
NC_007622:567500:584784584784585449666Staphylococcus aureus RF122, complete genomehypothetical protein2e-1582.8
NC_003923:591000:611249611249611914666Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein2e-1582.8
NC_017338:588983:605064605064605729666Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeGlcNAc-PI de-N-acetylasee3e-1582.4
NC_013946:2854219:285743928574392858254816Meiothermus ruber DSM 1279 chromosome, complete genomeLmbE family protein4e-1375.1
NC_010184:3213347:322655132265513227213663Bacillus weihenstephanensis KBAB4, complete genomeLmbE family protein4e-1271.6
NC_021177:5419620:5443131544313154441501020Streptomyces fulvissimus DSM 40593, complete genome1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase3e-1168.9
NC_016111:4245876:426262642626264263528903Streptomyces cattleya NRRL 8057, complete genomeN-acetyl-1-D-myo-inosityl-2-amino-21e-1067
NC_004193:2522000:254029025402902540961672Oceanobacillus iheyensis HTE831, complete genomehypothetical protein2e-1065.9
NC_016002:3704006:371737637173763718071696Pseudogulbenkiania sp. NH8B, complete genomeGlcNAc-PI de-N-acetylase family protein3e-1065.5
NC_014165:3559305:356047935604793561387909Thermobispora bispora DSM 43833 chromosome, complete genome1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase8e-1063.9
NC_013223:724394:7325597325597342681710Desulfohalobium retbaense DSM 5692, complete genomeLmbE family protein1e-0963.5
NC_012704:652589:674752674752675690939Corynebacterium kroppenstedtii DSM 44385, complete genomemycothiol conjugate amidase1e-0963.5
NC_006510:3133965:314602331460233146682660Geobacillus kaustophilus HTA426, complete genomehypothetical protein5e-0961.6
NC_016582:11672500:116812481168124811682057810Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein5e-0961.6
NC_015437:27325:594805948060169690Selenomonas sputigena ATCC 35185 chromosome, complete genomeLmbE family protein2e-0859.3
NC_008025:2407618:242384924238492424595747Deinococcus geothermalis DSM 11300, complete genomeLmbE-like protein protein2e-0859.3
NC_020409:1407857:142114714211471421929783Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein2e-0859.3
NC_012491:5628000:564281456428145643482669Brevibacillus brevis NBRC 100599, complete genomehypothetical protein3e-0858.9
NC_015731:447411:4545824545824582263645Nitrosomonas sp. Is79A3 chromosome, complete genomeLmbE family protein3e-0858.9
NC_013222:2308542:230972923097292310451723Robiginitalea biformata HTCC2501, complete genomeGlcNAc-PI de-N-acetylase family protein4e-0858.5
NC_013093:832971:848250848250849101852Actinosynnema mirum DSM 43827, complete genome1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase9e-0857.4
NC_007333:537292:554504554504555364861Thermobifida fusca YX, complete genomehypothetical protein9e-0857.4
NC_012590:1004816:101969110196911020581891Corynebacterium aurimucosum ATCC 700975, complete genomemycothiol conjugate amidase1e-0757
NC_007530:1459412:146689214668921467596705Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein2e-0756.2
NC_005945:1459357:146684614668461467550705Bacillus anthracis str. Sterne, complete genomehypothetical protein2e-0756.2
NC_003552:3058523:305852330585233059452930Methanosarcina acetivorans C2A, complete genomehypothetical protein2e-0755.8
NC_017093:835260:856780856780857661882Actinoplanes missouriensis 431, complete genomeputative mycothiol conjugate amidase4e-0755.1
NC_015660:391627:404035404035404709675Geobacillus thermoglucosidasius C56-YS93 chromosome, completeLmbE family protein6e-0754.3
NC_011026:2533017:256581825658182566483666Chloroherpeton thalassium ATCC 35110, complete genomeLmbE family protein1e-0653.5
NC_008278:6717485:6739787673978767409891203Frankia alni ACN14a, complete genomehypothetical protein3e-0652.4
NC_014221:591785:615990615990616664675Truepera radiovictrix DSM 17093 chromosome, complete genomeLmbE family protein3e-0652.4
NC_015703:234960:245781245781246500720Runella slithyformis DSM 19594 chromosome, complete genomeLmbE family protein5e-0651.6
NC_016111:4115097:411827741182774119152876Streptomyces cattleya NRRL 8057, complete genomehypothetical protein7e-0651.2