Pre_GI: BLASTP Hits

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Query: NC_001263:662666:662666 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 662666, End: 664006, Length: 1341

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015387:261799:2617992617992630371239Marinithermus hydrothermalis DSM 14884 chromosome, complete genomesodium/hydrogen exchanger2e-39163
NC_013851:2610847:2634772263477226360581287Allochromatium vinosum DSM 180 chromosome, complete genomesodium/hydrogen exchanger3e-35149
NC_002971:1523065:1535813153581315370661254Coxiella burnetii RSA 493, complete genomemonovalent cation/proton antiporter subunit, putative2e-31137
NC_015497:3497680:3515092351509235163751284Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomesodium/hydrogen exchanger1e-30134
NC_012560:3282704:3287924328792432891951272Azotobacter vinelandii DJ, complete genomeNa+/H+ antiporter NhaP protein3e-30133
NC_021150:3282702:3287922328792232891931272Azotobacter vinelandii CA6, complete genomeNa+/H+ antiporter NhaP protein3e-30133
NC_012988:1777618:1808831180883118098801050Methylobacterium extorquens DM4, complete genomesodium/hydrogen exchanger1e-28128
NC_009654:3316458:3316458331645833177441287Marinomonas sp. MWYL1, complete genomesodium/hydrogen exchanger2e-27124
NC_011757:3540992:3540992354099235422541263Methylobacterium chloromethanicum CM4, complete genomesodium/hydrogen exchanger2e-26120
NC_011184:325797:3473403473403485391200Vibrio fischeri MJ11 chromosome I, complete sequenceNhaP-type Na+/H+ and K+/H+ antiporter7e-26118
NC_009052:1394000:1400146140014614014501305Shewanella baltica OS155, complete genomesodium/hydrogen exchanger8e-26118
NC_009665:1495473:1502903150290315042071305Shewanella baltica OS185 chromosome, complete genomesodium/hydrogen exchanger1e-25118
NC_016901:1527877:1534474153447415357781305Shewanella baltica OS678 chromosome, complete genomesodium/hydrogen exchanger1e-25117
NC_006677:1503513:1507798150779815089461149Gluconobacter oxydans 621H, complete genomeNa+/H+ Antiporter NhaA4e-25116
NC_013210:57881:6150661506627681263Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-011, completeNa+/H+ antiporter NhaA/NhaP8e-24112
NC_017101:54767:6113461134623961263Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-010, completeNa+/H+ antiporter NhaA/NhaP8e-24112
NC_017117:54767:6113461134623961263Acetobacter pasteurianus IFO 3283-22 plasmid pAPA22-010, completeNa+/H+ antiporter NhaA/NhaP8e-24112
NC_017130:54759:6112661126623881263Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-013, completeNa+/H+ antiporter NhaA/NhaP8e-24112
NC_017134:54783:6115061150624121263Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-012, completeNa+/H+ antiporter NhaA/NhaP8e-24112
NC_017136:54751:6111861118623801263Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-014, completeNa+/H+ antiporter NhaA/NhaP8e-24112
NC_017143:54767:6113461134623961263Acetobacter pasteurianus IFO 3283-07 plasmid pAPA07-010, completeNa+/H+ antiporter NhaA/NhaP8e-24112
NC_016027:2446806:2460592246059224618541263Gluconacetobacter xylinus NBRC 3288, complete genomeNa+/H+ antiporter1e-23111
NC_011004:4073916:4106218410621841074711254Rhodopseudomonas palustris TIE-1, complete genomesodium/hydrogen exchanger2e-22107
NC_006570:1526071:1543156154315615444541299Francisella tularensis subsp. tularensis Schu 4, complete genomeNa+/H+ antiporter2e-1997.4
NC_008245:1525877:1542962154296215442601299Francisella tularensis subsp. tularensis FSC 198, complete genomeNa+/H+ antiporter2e-1997.4
NC_009257:775538:7787337787337800311299Francisella tularensis subsp. tularensis WY96-3418 chromosome,monovalent cation:proton antiporter family protein2e-1997.4
NC_016933:1601821:1618906161890616202041299Francisella tularensis TIGB03 chromosome, complete genomeH+ antiporter NhaP2e-1997.4
NC_016937:1525914:1542999154299915442971299Francisella tularensis subsp. tularensis TI0902 chromosome,H+ antiporter NhaP2e-1997.4
NC_007880:290059:2900592900592913571299Francisella tularensis subsp. holarctica, complete genomeNa+/H+ antiporter3e-1997.1
NC_008369:291640:2916402916402929381299Francisella tularensis subsp. holarctica OSU18, complete genomeCPA1 family monovalent cation:proton (H+) antiporter-13e-1997.1
NC_008601:1560482:1595030159503015963281299Francisella tularensis subsp. novicida U112, complete genomemonovalent cation:proton antiporter-15e-1995.9
NC_009749:289695:2896952896952907411047Francisella tularensis subsp. holarctica FTA, complete genomeNa+/H+ antiporter3e-1893.6
NC_020209:4312892:431697043169704317911942Pseudomonas poae RE*1-1-14, complete genomeputative Na+/H+ antiporter membrane protein4e-1789.7
NC_015696:105748:1072831072831085331251Francisella sp. TX077308 chromosome, complete genomeNa+/H+ antiporter NhaP5e-1789.4
NC_020209:4312892:434617343461734346556384Pseudomonas poae RE*1-1-14, complete genomeputative Na+/H+ antiporter membrane protein3e-0757