Pre_GI: BLASTP Hits

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Query: NC_001263:2574755:2593395 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 2593395, End: 2594099, Length: 705

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016111:613729:614598614598615209612Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-22106
NC_013959:2449315:245632724563272456947621Sideroxydans lithotrophicus ES-1 chromosome, complete genomeflavin reductase domain protein FMN-binding protein2e-22105
NC_015410:2505168:252739525273952528000606Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein2e-21102
NC_003047:2798367:279836727983672798993627Sinorhizobium meliloti 1021, complete genomehypothetical protein6e-21101
NC_007802:3252300:325402532540253254630606Jannaschia sp. CCS1, complete genomeflavin reductase-like, FMN-binding6e-2097.8
NC_019697:1696000:169870516987051699379675Chamaesiphon minutus PCC 6605, complete genomeconserved protein of DIM6/NTAB family8e-1994
NC_014935:1223817:124408012440801244679600Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeflavin reductase domain protein fmn-binding protein1e-1789.7
NC_003902:555699:569862569862570494633Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein1e-1686.7
NC_007086:557789:571952571952572584633Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein1e-1686.7
NC_009256:1282793:130437513043751305055681Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein2e-1685.9
NC_007508:570000:582574582574583248675Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein3e-1685.5
NC_018665:2563375:256570825657082566301594Exiguobacterium antarcticum B7 chromosome, complete genomeHypothetical protein1e-1479.7
NC_008752:3828438:383017238301723830801630Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein3e-1478.6
NC_015554:2505437:250865825086582509275618Alteromonas sp. SN2 chromosome, complete genomehypothetical protein6e-1477.8
NC_010556:2773396:277576427757642776357594Exiguobacterium sibiricum 255-15, complete genomehypothetical protein1e-1376.6
NC_020272:430500:449932449932450552621Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein3e-1375.5
NC_009725:3447336:344802334480233448643621Bacillus amyloliquefaciens FZB42, complete genomeYwrF3e-1375.1
NC_020410:3440327:344089134408913441511621Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeUncharacterized protein ywrF / Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family3e-1375.1
NC_017188:3482500:348355334835533484173621Bacillus amyloliquefaciens TA208 chromosome, complete genomehypothetical protein5e-1374.7
NC_017191:3483231:348521634852163485836621Bacillus amyloliquefaciens XH7 chromosome, complete genomehypothetical protein5e-1374.7
NC_014551:3515462:351626835162683516954687Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein5e-1374.7
NC_017190:3528229:353033135303313530951621Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein4e-1374.7
NC_007645:2294553:229455322945532295167615Hahella chejuensis KCTC 2396, complete genomeConserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family8e-1373.9
NC_007953:1043957:104840810484081049016609Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein8e-1373.9
NC_007908:1108494:111420211142021114894693Rhodoferax ferrireducens T118, complete genomehypothetical protein2e-1272.4
NC_010694:2492378:249801224980122498638627Erwinia tasmaniensis, complete genomeConserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family9e-1270.5
NC_004722:5194000:522947652294765230087612Bacillus cereus ATCC 14579, complete genomeNitrilotriacetate monooxygenase component B3e-1065.5
NC_014171:5107956:514133251413325141943612Bacillus thuringiensis BMB171 chromosome, complete genomenitrilotriacetate monooxygenase3e-1065.5
NC_013592:1602242:162335516233551623975621Dickeya dadantii Ech586, complete genomeflavin reductase domain protein FMN-binding protein4e-1065.1
NC_011725:5201995:523745552374555238066612Bacillus cereus B4264 chromosome, complete genomehypothetical protein5e-1064.7
NC_011772:5158680:519141251914125192023612Bacillus cereus G9842, complete genomehypothetical protein5e-1064.7
NC_006322:1959918:197133519713351971943609Bacillus licheniformis ATCC 14580, complete genomeYwrF9e-1063.9
NC_011773:5091609:511082051108205111431612Bacillus cereus AH820 chromosome, complete genomehypothetical protein8e-1063.9
NC_007530:5033095:505113650511365051747612Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein8e-1063.9
NC_003997:5032969:505101050510105051621612Bacillus anthracis str. Ames, complete genomehypothetical protein8e-1063.9
NC_012581:5052000:505366850536685054279612Bacillus anthracis str. CDC 684 chromosome, complete genomehypothetical protein8e-1063.9
NC_012659:5031827:505103650510365051647612Bacillus anthracis str. A0248, complete genomehypothetical protein8e-1063.9
NC_016779:5009320:504450050445005045111612Bacillus cereus F837/76 chromosome, complete genomeNitrilotriacetate monooxygenase component B1e-0963.2
NC_008600:5046000:507985850798585080469612Bacillus thuringiensis str. Al Hakam, complete genomepossible flavin reductase1e-0963.2
NC_017200:5149528:516887551688755169486612Bacillus thuringiensis serovar finitimus YBT-020 chromosome,hypothetical protein1e-0963.2
NC_011969:4993386:502894950289495029560612Bacillus cereus Q1 chromosome, complete genomehypothetical protein1e-0963.2
NC_003909:4996783:502970950297095030320612Bacillus cereus ATCC 10987, complete genomehypothetical protein1e-0963.2
NC_005957:5037499:505583850558385056449612Bacillus thuringiensis serovar konkukian str. 97-27, completeconserved hypothetical protein, possible flavin reductase2e-0963.2