Pre_GI: BLASTP Hits

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Query: NC_001263:2574755:2592593 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 2592593, End: 2593270, Length: 678

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015161:2018493:204527620452762045893618Deinococcus proteolyticus MRP chromosome, complete genomeHhH-GPD family protein4e-58224
NC_015138:3160764:317863731786373179296660Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeHhH-GPD family protein2e-27122
NC_014153:436082:453766453766454431666Thiomonas intermedia K12 chromosome, complete genomeHhH-GPD family protein3e-26118
NC_014376:3547218:356876135687613569378618Clostridium saccharolyticum WM1 chromosome, complete genomeHhH-GPD family protein4e-26118
NC_007347:1215358:121535812153581216128771Ralstonia eutropha JMP134 chromosome 1, complete sequenceHhH-GPD6e-26117
NC_013967:2641433:264406526440652644646582Haloferax volcanii DS2 chromosome, complete genomeDNA-3-methyladenine glycosylase6e-26117
NC_010084:1299387:132045413204541321335882Burkholderia multivorans ATCC 17616 chromosome 1, completeHhH-GPD family protein2e-25115
NC_008800:2695977:272695627269562727558603Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative glycosidase2e-24112
NC_015224:2017781:202620320262032026805603Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative glycosidase3e-24111
NC_014729:1185294:118964411896441190207564Halogeometricum borinquense DSM 11551 chromosome, complete genomeDNA-3-methyladenine glycosylase ii3e-24111
NC_019902:1061432:106569610656961066316621Thioalkalivibrio nitratireducens DSM 14787, complete genomeHhH-GPD base excision DNA repair family protein; Probable 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase2e-23109
NC_012559:1663214:166557916655791666205627Laribacter hongkongensis HLHK9, complete genomeHhH-GPD family protein2e-23108
NC_016012:16134:308023080231470669Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeDNA-3-methyladenine glycosylase II1e-22106
NC_009937:412302:425901425901426554654Azorhizobium caulinodans ORS 571, complete genomeHhH-GPD protein5e-22104
NC_007974:138176:157294157294157950657Ralstonia metallidurans CH34 chromosome 2, complete sequenceHhH-GPD2e-1995.9
NC_007510:1921251:194876219487621949406645Burkholderia sp. 383 chromosome 1, complete sequenceDNA-3-methyladenine glycosylase II2e-1995.9
NC_006677:1052031:105441010544101055069660Gluconobacter oxydans 621H, complete genomeDNA-3-methyladenine glycosylase2e-1995.9
NC_004310:1578918:159541615954161596114699Brucella suis 1330 chromosome I, complete sequencebase-excision DNA repair protein2e-1892.8
NC_010167:1085106:110341111034111104109699Brucella suis ATCC 23445 chromosome II, complete sequencehypothetical protein2e-1892.8
NC_015857:1609670:162617016261701626868699Brucella pinnipedialis B2/94 chromosome chromosome 1, completebase-excision DNA repair protein2e-1892.8
NC_010103:1577750:159424915942491594947699Brucella canis ATCC 23365 chromosome I, complete sequenceHhH-GPD family protein2e-1892.8
NC_007618:1593886:161038816103881611086699Brucella melitensis biovar Abortus 2308 chromosome I, completeHhH-GPD2e-1892.8
NC_010742:1595065:161156516115651612263699Brucella abortus S19 chromosome 1, complete sequenceHhH-GPD2e-1892.8
NC_003317:392271:392271392271392945675Brucella melitensis 16M chromosome I, complete sequenceDNA-3-METHYLADENINE GLYCOSIDASE2e-1892.8
NC_006932:1596732:161323216132321613891660Brucella abortus biovar 1 str. 9-941 chromosome I, completebase-excision DNA repair protein1e-1892.8
NC_015634:2445396:246029224602922461155864Bacillus coagulans 2-6 chromosome, complete genomeDNA-3-methyladenine glycosylase II4e-1788.2
NC_016023:2163000:216489121648912165754864Bacillus coagulans 36D1 chromosome, complete genomeHhH-GPD family protein1e-1583.6
NC_017188:753039:756552756552757415864Bacillus amyloliquefaciens TA208 chromosome, complete genomeDNA-modified purine glycosidase3e-1375.5
NC_014551:809025:812537812537813400864Bacillus amyloliquefaciens DSM 7, complete genomeDNA-modified purine glycosidase3e-1375.5
NC_017191:754453:757897757897758829933Bacillus amyloliquefaciens XH7 chromosome, complete genomeDNA-modified purine glycosidase3e-1375.1
NC_017190:794820:798264798264799196933Bacillus amyloliquefaciens LL3 chromosome, complete genomeDNA-modified purine glycosidase3e-1375.1
UCMB5137:409500:411192411192412184993Bacillus atrophaeus UCMB-5137putative DNA-modified purine glycosidase8e-1373.9
NC_015850:1947000:196800819680081968949942Acidithiobacillus caldus SM-1 chromosome, complete genomeDNA-3-methyladenine glycosylase II1e-1273.2
NC_020541:2487427:2507092250709225085971506Rhodanobacter sp. 2APBS1, complete genome3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase2e-1272.8
NC_009328:448224:450895450895451761867Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeDNA-3-methyladenine glycosylase II3e-1272
NC_010694:2565580:2588245258824525896961452Erwinia tasmaniensis, complete genomePutative DNA-3-methyladenine glycosidase II2e-1169.3
NC_015942:403296:4036114036114050891479Acidithiobacillus ferrivorans SS3 chromosome, complete genomeAraC family DNA repair protein and transcriptional regulator2e-1169.3
NC_009076:106807:127526127526128440915Burkholderia pseudomallei 1106a chromosome I, complete sequenceDNA-3-methyladenine glycosylase 28e-1063.9
NC_009074:94000:114238114238115152915Burkholderia pseudomallei 668 chromosome I, complete sequenceDNA-3-methyladenine glycosylase II8e-1063.9
NC_007651:72952:9058390583916141032Burkholderia thailandensis E264 chromosome I, complete sequenceDNA-3-methyladenine glycosylase II8e-1063.9
NC_014924:2108116:2136546213654621380781533Pseudoxanthomonas suwonensis 11-1 chromosome, complete genometranscriptional regulator, AraC family8e-1063.9
NC_006512:696000:712737712737713330594Idiomarina loihiensis L2TR, complete genome3-methyladenine DNA glycosylase9e-0960.5
NC_015948:1636491:164375616437561644166411Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeDNA-3-methyladenine glycosylase9e-0960.5
NC_014363:1344768:135571013557101356207498Olsenella uli DSM 7084 chromosome, complete genomeHhH-GPD family protein1e-0860.5
NC_005126:142500:159681159681160592912Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-0860.1
NC_013169:612456:645400645400646260861Kytococcus sedentarius DSM 20547, complete genome3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase2e-0859.7
NC_012108:3965433:3965671396567139667321062Desulfobacterium autotrophicum HRM2, complete genomeAlkA2e-0859.3
NC_014391:6000834:6021937602193760233881452Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeAlkA domain-containing protein1e-0756.6
NC_020181:360500:360534360534361382849Enterobacter aerogenes EA1509E, complete genomeDNA-3-methyladenine glycosylase II2e-0755.8
NC_013947:3347174:3371396337139633728891494Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, AraC family2e-0755.8
NC_015948:1636491:164885316488531649104252Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeDNA-3-methyladenine glycosylase5e-0754.7
NC_014318:7821227:782122778212277822132906Amycolatopsis mediterranei U32 chromosome, complete genomeDNA-3-methyladenine glycosylase II4e-0651.6
NC_014121:3453815:345713334571333458005873Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3-methyl-adenine DNA glycosylase II4e-0651.6