Pre_GI: BLASTP Hits

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Query: NC_001263:2461941:2469804 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 2469804, End: 2470949, Length: 1146

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020126:5608880:5607498560749856088831386Myxococcus stipitatus DSM 14675, complete genomecytochrome P450 family protein6e-1789
NC_012988:769981:8104588104588118581401Methylobacterium extorquens DM4, complete genomemonooxygenase, Cytochrome P4502e-1480.5
NC_013440:1698047:1715903171590317172011299Haliangium ochraceum DSM 14365, complete genomecytochrome P4501e-1377.4
NC_010172:798923:8368068368068382061401Methylobacterium extorquens PA1, complete genomecytochrome P4501e-1377.4
NC_000962:1870842:1892270189227018935621293Mycobacterium tuberculosis H37Rv, complete genomeProbable cytochrome P450 139 CYP1399e-1374.7
NC_009565:1866214:1887660188766018889521293Mycobacterium tuberculosis F11, complete genomecytochrome P450 139 cyp1399e-1374.7
NC_008769:1876109:1897534189753418988261293Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative cytochrome P450 139 CYP1399e-1374.7
NC_019950:1870863:1893212189321218945041293Mycobacterium canettii CIPT 140060008 complete genomePutative cytochrome P450 1399e-1374.7
NC_009525:1872360:1893788189378818950801293Mycobacterium tuberculosis H37Ra, complete genomeputative cytochrome P450 139 CYP1399e-1374.7
NC_015848:1896660:1919009191900919203011293Mycobacterium canettii CIPT 140010059, complete genomeputative cytochrome P450 139 CYP1399e-1374.7
NC_002945:1856228:1877656187765618789481293Mycobacterium bovis AF2122/97, complete genomecytochrome P450 139 CYP1399e-1374.7
NC_012943:2525835:2529150252915025304421293Mycobacterium tuberculosis KZN 1435 chromosome, complete genomecytochrome P450 139 cyp1399e-1374.7
NC_016768:2521225:2525823252582325271151293Mycobacterium tuberculosis KZN 4207 chromosome, complete genomecytochrome P450 139 cyp1399e-1374.7
NC_016804:1846388:1867813186781318691051293Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative cytochrome P450 1399e-1374.7
NC_014355:139324:1554641554641568461383Candidatus Nitrospira defluvii, complete genomecytochrome P4501e-1274.3
NC_014960:2111397:2127456212745621288171362Anaerolinea thermophila UNI-1, complete genomeputative cytochrome P4509e-1271.6
NC_008027:5842740:5855789585578958572221434Pseudomonas entomophila L48, complete genomecytochrome P4501e-1171.2
NC_019974:1184871:1241865124186512432081344Natronococcus occultus SP4, complete genomecytochrome P4502e-1170.5
NC_009075:15017:3564835648370541407Burkholderia pseudomallei 668 chromosome II, complete sequenceCytochrome P4507e-1168.6
NC_012032:2059000:2076405207640520777631359Chloroflexus sp. Y-400-fl, complete genomecytochrome P4501e-1067.8
NC_010175:2062932:2080941208094120822991359Chloroflexus aurantiacus J-10-fl, complete genomecytochrome P4501e-1067.8
NC_016582:11535695:1155563011555630115570241395Streptomyces bingchenggensis BCW-1 chromosome, complete genomecytochrome P4502e-1067
NC_014221:3175013:3179962317996231812721311Truepera radiovictrix DSM 17093 chromosome, complete genomecytochrome P4502e-1067
NC_008268:3233961:3253393325339332547781386Rhodococcus sp. RHA1, complete genomecytochrome P450 CYP1363e-1066.6
NC_013422:1604157:1602710160271016041641455Halothiobacillus neapolitanus c2, complete genomecytochrome P4504e-1066.2
NC_014297:476510:5071625071625084601299Halalkalicoccus jeotgali B3 chromosome, complete genomecytochrome P4509e-1064.7
NC_015064:1722776:1732564173256417339641401Acidobacterium sp. MP5ACTX9 chromosome, complete genomecytochrome P4501e-0964.7
NC_003155:1137817:1169630116963011710001371Streptomyces avermitilis MA-4680, complete genomecytochrome P450 hydroxylase1e-0964.3
NC_009937:53082:6912669126705321407Azorhizobium caulinodans ORS 571, complete genomecytochrome P4502e-0963.9
NC_014318:8590078:8599005859900586003301326Amycolatopsis mediterranei U32 chromosome, complete genomecytochrome P4503e-0963.2
NC_017186:8588000:8599061859906186003861326Amycolatopsis mediterranei S699 chromosome, complete genomecytochrome P4503e-0963.2
NC_009953:1484000:1495978149597814973241347Salinispora arenicola CNS-205 chromosome, complete genomecytochrome P4504e-0962.8
NC_013440:1044100:1067019106701910683621344Haliangium ochraceum DSM 14365, complete genomecytochrome P4507e-0962
NC_018681:5695343:572240457224045723384981Nocardia brasiliensis ATCC 700358 chromosome, complete genomeCytochrome P450 protein8e-0962
NC_016582:1018014:1044429104442910458081380Streptomyces bingchenggensis BCW-1 chromosome, complete genomecytochrome P450 hydroxylase2e-0860.8
NC_008319:2112000:2124331212433121256651335Synechococcus sp. CC9311, complete genomecytochrome P4502e-0860.5
NC_013440:1044100:1068367106836710697221356Haliangium ochraceum DSM 14365, complete genomecytochrome P4502e-0860.5
NC_015593:2103815:2138734213873421401041371Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completemonooxygenase3e-0860.1
NC_007949:9839:1318213182145701389Polaromonas sp. JS666 plasmid 1, complete sequencecytochrome P4501e-0758.2
NC_010612:3813481:3819770381977038212271458Mycobacterium marinum M, complete genomecytochrome P450 136B2 Cyp136B22e-0757.4
NC_008705:3377697:3407840340784034092971458Mycobacterium sp. KMS, complete genomecytochrome P4502e-0757
NC_009077:3323291:3353434335343433548911458Mycobacterium sp. JLS, complete genomecytochrome P4502e-0757
NC_008146:3349415:3379558337955833810151458Mycobacterium sp. MCS, complete genomecytochrome P4502e-0757
NC_008595:661507:6820086820086833631356Mycobacterium avium 104, complete genomecytochrome P450 512e-0757
NC_010397:2063561:2077851207785120793081458Mycobacterium abscessus chromosome Chromosome, complete sequenceProbable cytochrome P4502e-0757
NC_016947:2380500:2419298241929824207221425Mycobacterium intracellulare MOTT-02 chromosome, complete genomecytochrome P4503e-0756.6
NC_013440:1044100:1069928106992810712621335Haliangium ochraceum DSM 14365, complete genomecytochrome P4504e-0756.2
NC_016604:5228500:5240085524008552415421458Mycobacterium rhodesiae NBB3 chromosome, complete genomecytochrome P4504e-0755.8
NC_016906:2845424:2863095286309528642851191Gordonia polyisoprenivorans VH2 chromosome, complete genomecytochrome P450 1098e-0755.1
NC_015161:2060369:2068283206828320696021320Deinococcus proteolyticus MRP chromosome, complete genomecytochrome P4508e-0755.1
NC_016109:62000:6700367003683341332Kitasatospora setae KM-6054, complete genomecytochrome P4501e-0654.7
NC_009921:6483660:6495897649589764971531257Frankia sp. EAN1pec, complete genomecytochrome P4501e-0654.7
NC_017904:2379387:2440452244045224419091458Mycobacterium sp. MOTT36Y chromosome, complete genomecytochrome P450 136B2 Cyp136B22e-0653.9
NC_011753:2018500:2033963203396320353361374Vibrio splendidus LGP32 chromosome 1, complete genomeCytochrome P4503e-0653.5
NC_017030:3381500:3386777338677733881891413Corallococcus coralloides DSM 2259 chromosome, complete genomecytochrome P450 family protein3e-0653.5
NC_009142:6109622:6115384611538461166971314Saccharopolyspora erythraea NRRL 2338, complete genomecytochrome P4503e-0653.1
NC_019673:3253650:3272068327206832734171350Saccharothrix espanaensis DSM 44229 complete genomeCytochrome P450 family protein5e-0652.8
NC_014976:2420000:2446305244630524475581254Bacillus subtilis BSn5 chromosome, complete genomefatty acid beta-hydroxylating cytochrome P4505e-0652.4