Pre_GI: BLASTP Hits

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Query: NC_001263:2236777:2245003 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 2245003, End: 2245082, Length: 80

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008025:316302:32895132895132902676Deinococcus geothermalis DSM 11300, complete genometRNA-Gly5e-0650.1
NC_012526:520947:53189053189053196576Deinococcus deserti VCD115, complete genometRNA-Gly5e-0650.1
NC_012526:131000:14660114660114667676Deinococcus deserti VCD115, complete genometRNA-Gly5e-0650.1
NC_014958:1268559:12813111281311128138676Deinococcus maricopensis DSM 21211 chromosome, complete genometRNA-Gly5e-0650.1
NC_015161:162000:17429017429017436576Deinococcus proteolyticus MRP chromosome, complete genometRNA-Gly5e-0650.1
NC_012526:2483000:24915742491574249164976Deinococcus deserti VCD115, complete genometRNA-Gly5e-0650.1
NC_008025:1998500:20104872010487201056276Deinococcus geothermalis DSM 11300, complete genometRNA-Gly5e-0650.1
NC_015161:2018493:20278862027886202796176Deinococcus proteolyticus MRP chromosome, complete genometRNA-Gly5e-0650.1
NC_014958:629459:64194464194464201976Deinococcus maricopensis DSM 21211 chromosome, complete genometRNA-Gly5e-0650.1
NC_015161:84526:98944989449901976Deinococcus proteolyticus MRP chromosome, complete genometRNA-Gly5e-0650.1
NC_014958:514225:52730852730852738376Deinococcus maricopensis DSM 21211 chromosome, complete genometRNA-Gly5e-0650.1