Pre_GI: BLASTP Hits

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Query: NC_001263:2236777:2242761 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 2242761, End: 2244233, Length: 1473

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008025:2407618:2424592242459224260761485Deinococcus geothermalis DSM 11300, complete genomeFAD dependent oxidoreductase7e-139494
NC_019940:3267436:3289335328933532908761542Thioflavicoccus mobilis 8321 chromosome, complete genomephytoene desaturase2e-1790.9
NC_014623:8648000:8660960866096086625101551Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephytoene desaturase5e-1169.7
NC_014829:4293583:4310703431070343121661464Bacillus cellulosilyticus DSM 2522 chromosome, complete genomephytoene desaturase1e-1068.2
NC_012623:799614:8140608140608154691410Sulfolobus islandicus Y.N.15.51 chromosome, complete genomephytoene desaturase3e-1067
NC_014623:8648000:8658457865845786599201464Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehydroxyneurosporene dehydrogenase1e-0965.1
NC_019940:3267436:3293093329309332946221530Thioflavicoccus mobilis 8321 chromosome, complete genomephytoene desaturase1e-0861.6
NC_016943:2054688:2054688205468820562201533Blastococcus saxobsidens DD2, complete genomePhytoene dehydrogenase8e-0858.9