Pre_GI: BLASTP Hits

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Query: NC_001263:2236777:2240288 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 2240288, End: 2241496, Length: 1209

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018868:4010615:4030193403019340318181626Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeacyl esterase6e-0755.8
NC_011749:34056:552735527356133861Escherichia coli UMN026 plasmid p1ESCUM, complete sequencealpha/beta hydrolase6e-0858.9
NC_016047:637778:6478766478766490031128Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completealpha/beta hydrolase superfamily protein5e-0756.2
NC_017195:2498113:2503489250348925046131125Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completealpha/beta hydrolase superfamily protein4e-0756.2
NC_014306:2518996:253217625321762533036861Erwinia billingiae Eb661, complete genomeAlpha/beta-fold hydrolase1e-0758.2
NC_015379:2505233:2537426253742625384541029Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein; putative exported protein5e-0652.8
NC_014168:869746:905006905006905920915Segniliparus rotundus DSM 44985 chromosome, complete genomedienelactone hydrolase4e-0653.1
NC_013222:229190:2635912635912656242034Robiginitalea biformata HTCC2501, complete genomedipeptidyl aminopeptidase3e-0756.6
NC_018080:1100047:111684111168411117764924Pseudomonas aeruginosa DK2 chromosome, complete genomehydrolase4e-0859.7
NC_015376:3320818:332740733274073328324918Burkholderia gladioli BSR3 chromosome chromosome 2, completehydrolase, alpha/beta fold family, putative2e-0860.5
NC_002516:4285477:428678742867874287710924Pseudomonas aeruginosa PAO1, complete genomehypothetical protein3e-0860.1
NC_004578:1719849:1740493174049317415211029Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-0756.6
NC_007005:4515853:4515853451585345168811029Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein4e-0756.2
NC_012796:129500:1321861321861332351050Desulfovibrio magneticus RS-1, complete genomehypothetical protein1e-0654.3
NC_007414:56508:911159111591975861Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequencehypothetical protein6e-0858.9
NC_003295:199354:2290102290102300381029Ralstonia solanacearum GMI1000, complete genomeHYPOTHETICAL SIGNAL PEPTIDE PROTEIN3e-0653.5
NC_013592:1602242:162231416223141623210897Dickeya dadantii Ech586, complete genomepeptidase S153e-0756.6
NC_017506:2993679:300126130012613002151891Marinobacter adhaerens HP15 chromosome, complete genomepeptidase S152e-0653.9
NC_015422:4508028:453215545321554533081927Alicycliphilus denitrificans K601 chromosome, complete genomepeptidase S151e-0551.6
NC_012588:742000:747086747086748009924Sulfolobus islandicus M.14.25 chromosome, complete genomepeptidase S153e-1066.6
NC_013729:4978401:498525649852564986089834Kribbella flavida DSM 17836, complete genomepeptidase S9 prolyl oligopeptidase active site domain protein6e-28125
NC_008463:1223012:123807912380791239002924Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative hydrolase3e-0859.7
NC_011770:1226923:124226812422681243191924Pseudomonas aeruginosa LESB58, complete genomeputative hydrolase3e-0860.1