Pre_GI: BLASTP Hits

Some Help

Query: NC_001263:2236777:2236777 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 2236777, End: 2237418, Length: 642

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013894:1:198081980820476669Thermocrinis albus DSM 14484 chromosome, complete genomephosphate uptake regulator, PhoU5e-37154
NC_009633:4733678:473506447350644735714651Alkaliphilus metalliredigens QYMF chromosome, complete genomephosphate uptake regulator PhoU1e-35149
NC_014152:2181360:220016822001682200830663Thermincola sp. JR, complete genomephosphate uptake regulator, PhoU4e-34144
NC_011145:4628000:465454846545484655249702Anaeromyxobacter sp. K, complete genomephosphate uptake regulator, PhoU5e-32137
NC_013857:478000:498829498829499599771Azospirillum sp. B510 plasmid pAB510c, complete sequencephosphate transport system protein1e-30132
NC_014623:6950638:695143069514306952119690Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephosphate transport system regulatory protein phou2e-30132
NC_009922:315870:319412319412320062651Alkaliphilus oremlandii OhILAs, complete genomephosphate uptake regulator, PhoU3e-30131
NC_014926:608894:638205638205638912708Thermovibrio ammonificans HB-1 chromosome, complete genomephosphate uptake regulator, PhoU3e-30131
NC_014377:961259:962050962050962712663Thermosediminibacter oceani DSM 16646 chromosome, complete genomephosphate uptake regulator, PhoU6e-29127
NC_013960:2366910:236779823677982368511714Nitrosococcus halophilus Nc4 chromosome, complete genomephosphate transport system regulatory protein PhoU6e-27120
NC_009092:1935281:195638919563891957090702Shewanella loihica PV-4, complete genomephosphate uptake regulator, PhoU1e-26120
NC_016901:1885694:189130518913051892015711Shewanella baltica OS678 chromosome, complete genomephosphate uptake regulator PhoU2e-26118
NC_009648:4497749:452339245233924524117726Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genometranscriptional regulator PhoU8e-26117
NC_004337:3590323:384031038403103841035726Shigella flexneri 2a str. 301, complete genomenegative regulator for pho regulon and putative enzyme in phosphate metabolism6e-26117
NC_010498:4166903:418152841815284182253726Escherichia coli SMS-3-5, complete genomephosphate transport system regulatory protein PhoU5e-26117
NC_002695:4678945:469356146935614694286726Escherichia coli O157:H7 str. Sakai, complete genomePhoU5e-26117
NC_011751:4373961:438859243885924389317726Escherichia coli UMN026 chromosome, complete genometranscriptional regulator PhoU5e-26117
NC_011750:4490573:450519845051984505923726Escherichia coli IAI39 chromosome, complete genometranscriptional regulator PhoU5e-26117
NC_002655:4747926:476254247625424763267726Escherichia coli O157:H7 EDL933, complete genomenegative regulator for pho regulon and putative enzyme in phosphate metabolism5e-26117
NC_007606:3755155:376086637608663761591726Shigella dysenteriae Sd197, complete genomenegative regulator for pho regulon5e-26117
NC_011353:4782040:479665647966564797381726Escherichia coli O157:H7 str. EC4115 chromosome, complete genometranscriptional regulator PhoU5e-26117
NC_013008:4738083:475269947526994753424726Escherichia coli O157:H7 str. TW14359 chromosome, complete genometranscriptional regulator PhoU5e-26117
NC_013941:4567820:458105945810594581784726Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephosphate transporter regulatory protein PhoU5e-26117
NC_012912:4737703:475725547572554757983729Dickeya zeae Ech1591, complete genomephosphate uptake regulator, PhoU6e-25114
NC_014500:4883794:488379448837944884525732Dickeya dadantii 3937 chromosome, complete genomenegative regulator of PhoR/PhoB two-component regulator6e-25114
NC_007907:4692336:470300647030064703665660Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-24110
NC_016027:346768:362751362751363452702Gluconacetobacter xylinus NBRC 3288, complete genomephosphate transport system protein PhoU1e-23109
NC_005085:1269787:132502313250231325727705Chromobacterium violaceum ATCC 12472, complete genomephosphate transport system regulatory protein1e-22106
NC_010730:741842:774624774624775289666Sulfurihydrogenibium sp. YO3AOP1, complete genomephosphate uptake regulator, PhoU5e-22104
NC_012526:1576775:157864715786471579297651Deinococcus deserti VCD115, complete genomeputative Phosphate uptake regulator, PhoU6e-22104
NC_008554:840079:853845853845854504660Syntrophobacter fumaroxidans MPOB, complete genomephosphate uptake regulator, PhoU2e-21102
NC_010524:3094303:309575530957553096459705Leptothrix cholodnii SP-6, complete genomephosphate uptake regulator, PhoU2e-2099.4
NC_009659:2523874:256043525604352561145711Janthinobacterium sp. Marseille chromosome, complete genomephosphate uptake regulator3e-2098.6
NC_014376:386650:390412390412391074663Clostridium saccharolyticum WM1 chromosome, complete genomephosphate uptake regulator, PhoU2e-1892.4
NC_017219:2372000:237644723764472377121675Bifidobacterium longum subsp. infantis ATCC 15697, complete genometwo-component response regulator1e-1790.1
NC_011593:2372362:237662923766292377303675Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,phosphate uptake regulator PhoU1e-1790.1
NC_015064:2421034:243521724352172435894678Acidobacterium sp. MP5ACTX9 chromosome, complete genomephosphate uptake regulator, PhoU2e-1789.4
NC_014122:1313303:331933193999681Methanocaldococcus infernus ME chromosome, complete genomephosphate uptake regulator, PhoU2e-1789
NC_015064:1984662:198848419884841989146663Acidobacterium sp. MP5ACTX9 chromosome, complete genomephosphate uptake regulator, PhoU3e-1685.1
NC_015214:1458480:147507114750711475709639Lactobacillus acidophilus 30SC chromosome, complete genomephosphate uptake regulator3e-1685.1
NC_013665:1865122:188366918836691884322654Methanocella paludicola SANAE, complete genomephosphate transport system protein PhoU6e-1684
NC_021175:845370:849690849690850343654Streptococcus oligofermentans AS 1.3089, complete genomephosphate transporter PhoU2e-1582.8
NC_010610:1385066:141158114115811412285705Lactobacillus fermentum IFO 3956, complete genomephosphate uptake regulator2e-1582
NC_009523:379705:397318397318397974657Roseiflexus sp. RS-1 chromosome, complete genomephosphate uptake regulator PhoU6e-1580.9
NC_020291:1389114:140208814020881402750663Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephosphate transport system protein PhoU8e-1477
NC_014246:1545214:156288315628831563548666Mobiluncus curtisii ATCC 43063 chromosome, complete genomePnaS family phosphate:sodium (Na+) symporter2e-1375.9
NC_009614:4844000:484941548494154850116702Bacteroides vulgatus ATCC 8482 chromosome, complete genometranscriptional regulator3e-1375.5
NC_016776:3258939:326402332640233264712690Bacteroides fragilis 638R, complete genomeputative phosphate transport chemotaxis-related protein3e-1375.1
NC_003228:3212500:322661532266153227304690Bacteroides fragilis NCTC 9343, complete genomeputative phosphate transport chemotaxis-related protein3e-1375.1
NC_009138:467268:495841495841496524684Herminiimonas arsenicoxydans, complete genomeTranscriptional repressor for high-affinity phosphate uptake3e-1271.6
NC_015948:2032399:203239920323992033079681Haloarcula hispanica ATCC 33960 chromosome chromosome I, completephosphate transport system regulatory protein PhoU4e-1271.6
NC_019974:1020500:103024110302411030909669Natronococcus occultus SP4, complete genomephosphate uptake regulator, PhoU3e-1168.6
NC_002937:1548081:155556415555641556241678Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completePhoU family protein1e-1066.6
NC_013947:2351208:235757823575782358228651Stackebrandtia nassauensis DSM 44728 chromosome, complete genomephosphate uptake regulator, PhoU1e-0963.2
NC_007929:428743:451624451624452280657Lactobacillus salivarius subsp. salivarius UCC118, complete genomePhosphate transport system protein3e-0962
NC_007604:1967770:198893119889311989605675Synechococcus elongatus PCC 7942, complete genomePhoU1e-0860.1
NC_012881:2878000:289829628982962898964669Desulfovibrio salexigens DSM 2638, complete genomephosphate uptake regulator, PhoU2e-0859.3
NC_015389:905165:907886907886908740855Coriobacterium glomerans PW2 chromosome, complete genomephosphate uptake regulator, PhoU6e-0857.8
NC_007164:453743:455269455269456009741Corynebacterium jeikeium K411, complete genomephosphate transport system regulator4e-0754.7
NC_013194:1955582:1974429197442919754931065Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completephosphate uptake regulator, PhoU1e-0653.5