Pre_GI: BLASTP Hits

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Query: NC_001263:1378605:1395685 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 1395685, End: 1396233, Length: 549

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014221:2188250:219250621925062193048543Truepera radiovictrix DSM 17093 chromosome, complete genomeprotein of unknown function DUF16841e-24112
NC_013714:796442:809934809934810593660Bifidobacterium dentium Bd1, complete genomehypothetical protein4e-1270.9
NC_013530:2492312:249539824953982496201804Xylanimonas cellulosilytica DSM 15894, complete genomeprotein of unknown function DUF16843e-1064.7
NC_015859:1147537:114753711475371148295759Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein5e-0857.4
NC_013530:2492312:249231224923122493124813Xylanimonas cellulosilytica DSM 15894, complete genomeprotein of unknown function DUF16845e-0753.9