Pre_GI: BLASTP Hits

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Query: NC_000962:2791019:2813173 Mycobacterium tuberculosis H37Rv, complete genome

Start: 2813173, End: 2813730, Length: 558

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain has been derived from the original human-lung H37 isolate in 1934, and has been used extensively worldwide in biomedical research. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016804:2735897:275633427563342756891558Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative oxidase regulatory-related protein2e-105381
NC_009525:2802987:282514128251412825698558Mycobacterium tuberculosis H37Ra, complete genomeputative oxidase regulatory-related protein2e-105381
NC_009565:2806000:282649128264912827048558Mycobacterium tuberculosis F11, complete genomehypothetical oxidase regulatory-related protein2e-105381
NC_008769:2754828:277696927769692777526558Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative oxidase regulatory-related protein2e-105381
NC_002755:2788000:280866128086612809218558Mycobacterium tuberculosis CDC1551, complete genomeMoaC family protein2e-105381
NC_002945:2757821:277997027799702780527558Mycobacterium bovis AF2122/97, complete genomeoxidase regulatory-like protein2e-105381
NC_012207:2747599:276974227697422770299558Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative oxidase regulatory-related protein2e-105381
NC_015848:2859145:288123428812342881791558Mycobacterium canettii CIPT 140010059, complete genomeputative oxidase regulatory-like protein5e-105379
NC_019950:2830682:285277128527712853328558Mycobacterium canettii CIPT 140060008 complete genomePutative oxidase regulatory-related5e-105379
NC_017026:2786000:280681028068102807271462Mycobacterium tuberculosis RGTB327 chromosome, complete genomeoxidase regulatory-related protein4e-86316
NC_002928:3781657:379784437978443798299456Bordetella parapertussis 12822, complete genomeputative transcriptional regulator5e-35147
NC_012522:3038890:304204230420423042512471Rhodococcus opacus B4, complete genomehypothetical protein1e-33142
NC_010067:4418000:442300944230094423563555Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-30132
NC_014098:1258559:126514812651481265645498Bacillus tusciae DSM 2912 chromosome, complete genomeMaoC domain protein dehydratase1e-29129
NC_016109:2629301:263723426372342637767534Kitasatospora setae KM-6054, complete genomeputative dehydratase4e-29127
NC_009142:2480608:251991725199172520459543Saccharopolyspora erythraea NRRL 2338, complete genomeMaoC-like dehydratase7e-27120
NC_017305:1258840:126886612688661269411546Corynebacterium pseudotuberculosis PAT10 chromosome, completeMaoC-like dehydratase1e-26119
NC_014329:1261480:127150612715061272051546Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein1e-26119
NC_016781:1261300:127132612713261271871546Corynebacterium pseudotuberculosis 3/99-5 chromosome, completemaoC-like dehydratase1e-26119
NC_016932:1246235:125624812562481256793546Corynebacterium pseudotuberculosis 316 chromosome, complete genomeMaoC-like dehydratase1e-26119
NC_017031:1261289:127131512713151271860546Corynebacterium pseudotuberculosis P54B96 chromosome, completeMaoC-like dehydratase1e-26119
NC_017300:1258861:126888712688871269432546Corynebacterium pseudotuberculosis 1002 chromosome, completeMaoC-like dehydratase1e-26119
NC_017301:1261167:127119312711931271738546Corynebacterium pseudotuberculosis C231 chromosome, completeMaoC-like dehydratase1e-26119
NC_017303:1261311:127133712713371271882546Corynebacterium pseudotuberculosis I19 chromosome, complete genomeMaoC-like dehydratase1e-26119
NC_019673:895418:915878915878916384507Saccharothrix espanaensis DSM 44229 complete genomeMaoC protein6e-26117
NC_009832:3313058:332714433271443327659516Serratia proteamaculans 568, complete genomeMaoC domain protein dehydratase6e-25113
NC_020126:5470090:548376454837645484291528Myxococcus stipitatus DSM 14675, complete genomeMaoC domain-containing protein1e-24112
NC_008268:361424:378692378692379222531Rhodococcus sp. RHA1, complete genomeprobable MaoC protein2e-23108
NC_014537:222114:2335392335392346031065Vulcanisaeta distributa DSM 14429 chromosome, complete genomeMaoC domain-containing protein dehydratase6e-23107
NC_018750:6869675:687817268781726878696525Streptomyces venezuelae ATCC 10712, complete genomeMesaconyl-CoA hydratase1e-22106
NC_008786:1767315:176855317685531769041489Verminephrobacter eiseniae EF01-2, complete genomeMaoC domain protein dehydratase1e-1892.8
NC_014098:1258559:126930112693011269771471Bacillus tusciae DSM 2912 chromosome, complete genomeMaoC domain protein dehydratase8e-1889.7
NC_008786:1767315:177027917702791770779501Verminephrobacter eiseniae EF01-2, complete genomeMaoC domain protein dehydratase1e-1789.4
NC_015593:2246352:225531622553162255801486Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeMaoC domain-containing protein dehydratase3e-1787.8
NC_012632:816000:833183833183833605423Sulfolobus islandicus M.16.27 chromosome, complete genomeMaoC domain-containing protein dehydratase3e-1787.8
NC_015593:2246352:225579822557982256289492Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeMaoC domain-containing protein dehydratase8e-1476.6
NC_016935:4435759:444050944405094440961453Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein4e-1374.3
NC_007974:2097334:213649921364992136972474Ralstonia metallidurans CH34 chromosome 2, complete sequenceMaoC-like dehydratase2e-1272
NC_000917:1693500:173271217327121733197486Archaeoglobus fulgidus DSM 4304, complete genomemonoamine oxidase regulatory protein, putative3e-1271.6
NC_010623:1871492:191292619129261913420495Burkholderia phymatum STM815 chromosome 2, complete sequenceMaoC domain protein dehydratase6e-1270.5
NC_014915:2149884:215206921520692152515447Geobacillus sp. Y412MC52 chromosome, complete genomeMaoC domain protein dehydratase2e-1168.9
NC_013411:3010000:301213830121383012584447Geobacillus sp. Y412MC61, complete genomeMaoC domain protein dehydratase2e-1168.9
NC_008025:1998500:2017004201700420190912088Deinococcus geothermalis DSM 11300, complete genomePhenylacetic acid degradation protein paaN4e-1167.8
NC_012526:520947:5228975228975250202124Deinococcus deserti VCD115, complete genomeputative phenylacetic acid degradation protein2e-1065.1
NC_010170:3944228:399311439931143993620507Bordetella petrii, complete genomeacyl dehydratase, MaoC family2e-1065.1
NC_012988:4633930:4639427463942746404731047Methylobacterium extorquens DM4, complete genomemesaconyl-CoA hydratase5e-1064.3
NC_010172:4185904:4192720419272041937661047Methylobacterium extorquens PA1, complete genomeMaoC domain protein dehydratase5e-1064.3
NC_011757:4293000:4296269429626942973151047Methylobacterium chloromethanicum CM4, complete genomeMaoC domain protein dehydratase6e-1063.9
NC_003106:91339:108376108376108810435Sulfolobus tokodaii str. 7, complete genomehypothetical protein9e-1063.2
NC_012808:4235567:4241066424106642421121047Methylobacterium extorquens AM1, complete genomeMesaconyl-CoA hydratase1e-0962.8
NC_013892:114884:1300321300321321192088Xenorhabdus bovienii SS-2004 chromosome, complete genomealdehyde dehydrogenase, phenylacetic acid degradation2e-0962
NC_012623:1563678:157500915750091575443435Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeMaoC domain-containing protein dehydratase4e-0960.8
NC_017272:921193:9455469455469475492004Thermus thermophilus SG0.5JP17-16 chromosome, complete genomephenylacetic acid degradation protein paaN1e-0859.7
NC_008786:2573558:257811925781192578565447Verminephrobacter eiseniae EF01-2, complete genomeMaoC domain protein dehydratase1e-0859.7
NC_009719:1135523:113886211388621139353492Parvibaculum lavamentivorans DS-1 chromosome, complete genomedehydratase2e-0858.9
NC_016027:2512297:253972425397242540212489Gluconacetobacter xylinus NBRC 3288, complete genomephenylacetic acid degradation protein paaN2e-0858.5
NC_014228:4408500:4408565440856544106372073Xenorhabdus nematophila ATCC 19061, complete genomeputative aldehyde dehydrogenase, phenylacetic acid degradation3e-0858.2
NC_014963:3942363:395871139587113959169459Terriglobus saanensis SP1PR4 chromosome, complete genomeMaoC domain-containing protein dehydratase4e-0857.8
NC_009720:1006201:1011209101120910132722064Xanthobacter autotrophicus Py2, complete genomebifunctional aldehyde dehydrogenase/enoyl-CoA hydratase9e-0753.1
NC_019964:1961237:196266819626681963135468Halovivax ruber XH-70, complete genomeacyl dehydratase9e-0753.1