Pre_GI: BLASTP Hits

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Query: NC_000919:773784:784772 Treponema pallidum subsp. pallidum str. Nichols, complete genome

Start: 784772, End: 785569, Length: 798

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was originally isolated in 1912 from a neurosyphilitic patient and is virulent. This organism is the causative agent of endemic and venereal syphilis. This sexual transmitted disease was first discovered in Europe at the end of the fifteenth century, however, the causative agent was not identified until 1905. At one time syphilis was the third most commonly reported communicable disease in the USA. Syphilis is characterized by multiple clinical stages and long periods of latent, asymptomatic infection. Although effective therapies have been available since the introduction of penicillin, syphilis remains a global health problem. This organisms is divided into subspecies each of which causes a specific disease. T. pallidum causes the venereal disease syphilis. T. pertenue, T. carateum and T. endemicum cause the skin infections yaws, pinta and bejel, respectively.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021508:775264:786252786252787049798Treponema pallidum subsp. pallidum SS14, complete genomeIIISP family Type III (virulence-related) secretory pathway protein2e-126452
NC_010741:775000:786220786220787017798Treponema pallidum subsp. pallidum SS14, complete genomeflagellar biosynthetic protein2e-126452
NC_016842:775368:786356786356787153798Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeIIISP family Type III (virulence-related) secretory pathway protein2e-126452
NC_016843:775371:786543786543787340798Treponema pallidum subsp. pertenue str. Gauthier chromosome,IIISP family Type III (virulence-related) secretory pathway protein2e-126452
NC_016844:775334:786710786710787507798Treponema pallidum subsp. pallidum DAL-1 chromosome, completeIIISP family Type III (virulence-related) secretory pathway protein2e-126452
NC_016848:775822:786810786810787607798Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeIIISP family Type III (virulence-related) secretory pathway protein2e-126452
NC_017268:775000:786022786022786819798Treponema pallidum subsp. pallidum str. Chicago chromosome,flagellar biosynthetic protein FliR2e-126452
NC_015714:768500:779654779654780451798Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeIIISP family Type III (virulence-related) secretory pathway protein4e-126450
NC_015500:1337180:135676713567671357606840Treponema brennaborense DSM 12168 chromosome, complete genomeflagellar biosynthetic protein FliR2e-55215
NC_013851:3300278:330354133035413304323783Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar biosynthetic protein FliR2e-1790.1
NC_018607:1134900:113600211360021136805804Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar biosynthetic protein FliR1e-1583.6
NC_018604:1329228:133032913303291331132804Brachyspira pilosicoli WesB complete genomeflagellar biosynthesis protein FliR1e-1583.6
NC_019908:852230:867123867123867926804Brachyspira pilosicoli P43/6/78 chromosome, complete genomeflagellar biosynthesis protein FliR1e-1583.6
NC_014330:2409559:241229724122972413058762Brachyspira pilosicoli 95/1000 chromosome, complete genomeflagellar biosynthesis protein FliR1e-1583.6
NC_014150:233194:249501249501250304804Brachyspira murdochii DSM 12563 chromosome, complete genomeflagellar biosynthetic protein FliR8e-1580.9
NC_017243:1499757:150607415060741506835762Brachyspira intermedia PWS/A chromosome, complete genomeflagellar biosynthetic protein fliR1e-1480.1
NC_014652:628435:650982650982651764783Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar biosynthetic protein flir4e-1478.6
NC_012225:377441:381131381131381892762Brachyspira hyodysenteriae WA1, complete genomeflagellar biosynthetic protein fliR5e-1478.2
NC_021184:2238500:225729222572922258059768Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar biosynthetic protein FliR2e-1273.2
NC_021182:2883716:2896408289640828982371830Clostridium pasteurianum BC1, complete genomeflagellar biosynthetic protein FlhB/flagellar biosynthetic protein FliR3e-1272.4
NC_009253:2615777:261684126168412617608768Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar biosynthesis protein FliR1e-1170.5
NC_009012:574145:595409595409596194786Clostridium thermocellum ATCC 27405, complete genometype III secretion system inner membrane R protein8e-1167.8
NC_020911:2921925:294200629420062942833828Octadecabacter antarcticus 307, complete genomeflagellar biosynthetic protein FliR1e-1067
NC_014328:1135854:1144086114408611459061821Clostridium ljungdahlii ATCC 49587 chromosome, complete genomebifunctional flagellar biosynthesis proteins FliR/FlhB2e-1066.6
NC_007759:1356439:135849013584901359269780Syntrophus aciditrophicus SB, complete genomeflagellar biosynthetic protein2e-1065.9
NC_012791:2386000:240507724050772405796720Variovorax paradoxus S110 chromosome 1, complete genometype III secretion system inner membrane R protein8e-1064.3
NC_009664:533021:536377536377537201825Kineococcus radiotolerans SRS30216, complete genomeflagellar biosynthetic protein FliR4e-0962
NC_020409:168916:186269186269187060792Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeFlagellar biosynthetic protein fliR4e-0962
NC_010501:4080937:409588040958804096656777Pseudomonas putida W619, complete genomeflagellar biosynthetic protein FliR6e-0961.6
NC_014377:1089894:108913310891331089897765Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar biosynthetic protein FliR7e-0961.2
NC_019940:293476:300920300920301693774Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar biosynthetic protein FliR1e-0860.8
NC_004129:1848701:185379718537971854564768Pseudomonas fluorescens Pf-5, complete genomeflagellar biosynthesis protein4e-0858.9
NC_015391:2059191:207640620764062077098693Carnobacterium sp. 17-4 chromosome, complete genomeflagellar biosynthesis protein FliR4e-0858.9
NC_013892:2689645:269080526908052691587783Xenorhabdus bovienii SS-2004 chromosome, complete genomeflagellar biosynthetic protein, regulator3e-0858.9
NC_002947:4931476:494658249465824947358777Pseudomonas putida KT2440, complete genomeflagellar biosynthesis protein3e-0858.9
NC_017986:4374979:437995243799524380728777Pseudomonas putida ND6 chromosome, complete genomeflagellar biosynthesis protein FliR5e-0858.5
NC_009512:1691930:169690316969031697679777Pseudomonas putida F1, complete genomeflagellar biosynthetic protein FliR5e-0858.5
NC_014366:1814000:183494918349491835728780Gamma proteobacterium HdN1, complete genomeFlagellar biosynthesis protein FliR5e-0858.2
NC_013223:685628:707734707734708516783Desulfohalobium retbaense DSM 5692, complete genomeflagellar biosynthetic protein FliR6e-0858.2
NC_008346:983816:984925984925985686762Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeflagellar biosynthetic protein FliR7e-0857.8
NC_018664:1663324:166832816683281669122795Clostridium acidurici 9a chromosome, complete genomeflagellar biosynthesis protein FliR1e-0757.4
NC_009802:1525144:155836215583621559123762Campylobacter concisus 13826, complete genomeflagellar biosynthetic protein FliR1e-0757
NC_008593:1103293:1122918112291811246451728Clostridium novyi NT, complete genomeflagellar biosynthetic protein FlhB2e-0756.2
NC_014562:1844268:187554118755411876326786Pantoea vagans C9-1 chromosome, complete genomeFlagellar biosynthetic protein fliR5e-0755.1
NC_007492:1735595:173754017375401738325786Pseudomonas fluorescens PfO-1, complete genomeflagellar biosynthesis protein6e-0755.1
NC_014560:171931:176676176676177443768Helicobacter pylori SJM180 chromosome, complete genomeflagellar biosynthesis protein FliR1e-0653.9
NC_009654:3849774:387610238761023876884783Marinomonas sp. MWYL1, complete genomeflagellar biosynthetic protein FliR1e-0653.9
NC_010723:833870:8508728508728527041833Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar biosynthetic protein1e-0653.9
NC_010674:858397:8725658725658744061842Clostridium botulinum B str. Eklund 17B, complete genomeflagellar biosynthetic protein1e-0653.5
NC_010520:2860960:2860960286096028627891830Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar biosynthetic protein FliR/FlhB3e-0652.4
NC_009698:2649453:2649453264945326512821830Clostridium botulinum A str. Hall chromosome, complete genomebifunctional flagellar biosynthesis protein FliR/FlhB4e-0652
NC_015921:272517:285654285654286379726Borrelia bissettii DN127 chromosome, complete genomeflagellar biosynthetic protein FliR6e-0651.6
NC_008277:272741:285978285978286766789Borrelia afzelii PKo, complete genomeflagellar biosynthesis protein6e-0651.2
NC_017238:272980:286217286217286942726Borrelia afzelii PKo chromosome, complete genomeflagellar biosynthetic protein FliR7e-0651.2
NC_006156:271410:285868285868286656789Borrelia garinii PBi chromosome linear, complete sequenceflagellar biosynthesis protein9e-0650.8