Pre_GI: BLASTP Hits

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Query: NC_000913:2746886:2793696 Escherichia coli K12, complete genome

Start: 2793696, End: 2794358, Length: 663

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007384:2933625:295532129553212956001681Shigella sonnei Ss046, complete genomeputative transcriptional regulator2e-126451
AC_000091:2747520:279433027943302794992663Escherichia coli W3110 DNA, complete genomeDNA-binding transcriptional dual regulator3e-126450
NC_010498:2847359:286928928692892869951663Escherichia coli SMS-3-5, complete genomegab operon transcriptional repressor CsiR3e-126450
AP010958:3238742:325819932581993258861663Escherichia coli O103:H2 str. 12009 DNA, complete genomeDNA-binding transcriptional dual regulator CsiR3e-126450
NC_010473:2839902:288546128854612886123663Escherichia coli str. K-12 substr. DH10B, complete genomeDNA-binding transcriptional dual regulator3e-126450
CP002185:2919752:294178929417892942451663Escherichia coli W, complete genomeDNA-binding transcriptional dual regulator3e-126450
NC_012759:2633949:267950826795082680170663Escherichia coli BW2952 chromosome, complete genomeDNA-binding transcriptional regulator CsiR3e-126450
NC_012967:2669182:269042726904272691089663Escherichia coli B str. REL606 chromosome, complete genomeDNA-binding transcriptional regulator CsiR3e-126450
NC_013353:3238742:325819932581993258861663Escherichia coli O103:H2 str. 12009, complete genomeDNA-binding transcriptional dual regulator CsiR3e-126450
NC_013361:3651150:367411436741143674776663Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional regulator CsiR3e-126450
NC_013364:3339768:335928833592883359950663Escherichia coli O111:H- str. 11128, complete genomeDNA-binding transcriptional dual regulator CsiR3e-126450
NC_016822:3065426:308750330875033088165663Shigella sonnei 53G, complete genomeDNA-binding transcriptional regulator CsiR3e-126450
NC_011750:2928990:296321029632102963872663Escherichia coli IAI39 chromosome, complete genomeDNA-binding transcriptional regulator CsiR1e-125448
NC_011601:2998326:302153730215373022199663Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding transcriptional regulator CsiR1e-125448
NC_008563:2946391:296554229655422966222681Escherichia coli APEC O1, complete genomeputative transcriptional regulator YgaE3e-125447
NC_011742:2863316:288287128828712883533663Escherichia coli S88 chromosome, complete genomeDNA-binding transcriptional regulator CsiR3e-125447
NC_017328:2785309:280711528071152807777663Shigella flexneri 2002017 chromosome, complete genomeputative transcriptional regulator4e-125447
NC_004337:2747917:276823327682332768895663Shigella flexneri 2a str. 301, complete genomeputative transcriptional regulator4e-125447
NC_004741:2741971:276286927628692763531663Shigella flexneri 2a str. 2457T, complete genomeputative transcriptional regulator4e-125447
CU928160:2818750:284058328405832841245663Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional dual regulator1e-124444
NC_011741:2818750:284058328405832841245663Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional regulator CsiR1e-124444
NC_007963:2232000:225526422552642255944681Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, GntR family8e-70263
NC_011004:4183993:422052942205294221239711Rhodopseudomonas palustris TIE-1, complete genometranscriptional regulator, GntR family6e-29127
NC_008391:1210451:123699212369921237723732Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, GntR family8e-25113
NC_016147:1825827:183168018316801832387708Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeGntR family transcriptional regulator1e-21102
NC_015957:5082172:509492150949215095619699Streptomyces violaceusniger Tu 4113 chromosome, complete genomeGntR family transcriptional regulator1e-1686.7
NC_004463:1369165:139094013909401391659720Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein1e-1376.3
NC_021150:2315362:231536223153622316084723Azotobacter vinelandii CA6, complete genometranscriptional regulator, GntR5e-1271.2
NC_012560:2315350:231535023153502316072723Azotobacter vinelandii DJ, complete genometranscriptional regulator, GntR5e-1271.2
NC_013739:2106662:212626421262642127019756Conexibacter woesei DSM 14684, complete genometranscriptional regulator, GntR family9e-1270.5
NC_009922:315870:338735338735339421687Alkaliphilus oremlandii OhILAs, complete genometranscriptional regulator, GntR family2e-1169.3
NC_020291:4033000:404904640490464049720675Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, GntR family2e-1169.3
NC_012108:3824977:383239938323993833073675Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (GntR family protein)1e-1067
NC_016642:2440070:247139724713972472071675Pseudovibrio sp. FO-BEG1 chromosome, complete genomeGntR family transcriptional regulator2e-1065.9
NC_010175:3712456:372623837262383726933696Chloroflexus aurantiacus J-10-fl, complete genomeGntR domain protein7e-1063.9
NC_014206:2971304:298470229847022985352651Geobacillus sp. C56-T3 chromosome, complete genomeGntR family transcriptional regulator7e-1063.9
NC_004463:2262467:226446822644682265103636Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein1e-0963.2
NC_016593:762216:786841786841787500660Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscriptional regulator, GntR2e-0962.8
NC_015563:2702787:271975127197512720407657Delftia sp. Cs1-4 chromosome, complete genomeGntR family transcriptional regulator2e-0962.4
NC_015554:4002952:401532540153254016101777Alteromonas sp. SN2 chromosome, complete genomeGntR family transcriptional regulator3e-0962
NC_014394:93344:110272110272110943672Gallionella capsiferriformans ES-2 chromosome, complete genometranscriptional regulator, GntR family3e-0962
NC_020210:661236:668499668499669158660Geobacillus sp. GHH01, complete genomeHTH-type transcriptional regulator3e-0962
NC_014840:205723:266022266022266699678Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, GntR family3e-0961.6
NC_013173:2261396:227212122721212272783663Desulfomicrobium baculatum DSM 4028, complete genometranscriptional regulator, GntR family3e-0961.6
NC_015458:1692401:169240116924011693138738Pusillimonas sp. T7-7 chromosome, complete genomeGntR family transcriptional regulator8e-0960.5
NC_008209:1385094:140394714039471404594648Roseobacter denitrificans OCh 114, complete genomeGntR-family transcription regulator, putative8e-0960.5
NC_014815:4621552:465611546561154656822708Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, gntr family1e-0859.7
NC_014011:472650:487302487302487922621Aminobacterium colombiense DSM 12261 chromosome, complete genometranscriptional regulator, GntR family2e-0859.3
NC_015594:410454:433254433254433979726Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeGntR family transcriptional regulator3e-0858.5
NC_009664:4423829:451763545176354518357723Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, GntR family3e-0858.5
NC_016906:4123000:412848441284844129173690Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative GntR family transcriptional regulator5e-0858.2
NC_018515:937994:937994937994938674681Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator5e-0858.2
NC_010511:7553703:755681175568117557539729Methylobacterium sp. 4-46 chromosome, complete genomeGntR family transcriptional regulator4e-0858.2
NC_014841:131308:133188133188133841654Pantoea sp. At-9b plasmid pPAT9B04, complete sequencetranscriptional regulator, GntR family4e-0858.2
NC_015145:3657103:367579336757933676560768Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometranscriptional regulator5e-0857.8
NC_013520:1905554:191069019106901911397708Veillonella parvula DSM 2008, complete genometranscriptional regulator, GntR family5e-0857.8
NC_013740:2218215:222773122277312228360630Acidaminococcus fermentans DSM 20731, complete genometranscriptional regulator, GntR family5e-0857.8
NC_011959:131800:135215135215135898684Thermomicrobium roseum DSM 5159, complete genomeGntR-family transcriptional regulator8e-0857.4
NC_015977:2565922:256592225659222566599678Roseburia hominis A2-183 chromosome, complete genomeGntR domain containing protein7e-0857.4
NC_011830:2177187:220439422043942205059666Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, GntR family9e-0857
NC_017275:927814:944351944351944989639Sulfolobus islandicus HVE10/4 chromosome, complete genomeGntR family transcriptional regulator1e-0756.6
NC_009667:1341000:136099613609961361676681Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceGntR family transcriptional regulator2e-0756.2
NC_011892:352652:367122367122367793672Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completetranscriptional regulator, GntR family3e-0755.5
NC_002754:1061851:108024710802471080885639Sulfolobus solfataricus P2, complete genomeTranscriptional regulator3e-0755.5
NC_013947:5546315:554851655485165549172657Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, GntR family3e-0755.5
NC_008148:2231045:227183422718342272532699Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, GntR family3e-0755.1
NC_008380:4078670:408035540803554081065711Rhizobium leguminosarum bv. viciae 3841, complete genomeputative GntR family transcriptional regulator6e-0754.3
NC_014640:5897421:590216059021605902852693Achromobacter xylosoxidans A8 chromosome, complete genomeGntR family transcriptional regulator6e-0754.3
NC_020829:809457:813097813097813771675Pseudomonas denitrificans ATCC 13867, complete genometranscriptional regulator6e-0754.3
NC_012522:3038890:304323930432393043943705Rhodococcus opacus B4, complete genomeputative GntR family transcriptional regulator8e-0753.9
NC_010170:3908500:393514939351493935682534Bordetella petrii, complete genometranscriptional regulator8e-0753.9
NC_002578:1434396:144095614409561441609654Thermoplasma acidophilum DSM 1728, complete genomeNta operon transcriptional regulator related protein7e-0753.9
NC_014831:2082304:210025021002502100963714Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, GntR family1e-0653.5
NC_007952:1293024:129591312959131296710798Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, GntR family1e-0653.5
NC_018644:1263891:127174812717481272407660Alpha proteobacterium HIMB59 chromosome, complete genometranscriptional regulator, gntR family,FCD domain-containing protein1e-0653.5
NC_008596:4104476:412930241293024129928627Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, GntR family protein1e-0653.5
NC_004193:2921103:293098429309842931643660Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator2e-0653.1
NC_016584:2244966:226257722625772263257681Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator1e-0653.1
NC_019791:1272850:130005613000561300721666Caldisphaera lagunensis DSM 15908 chromosome, complete genometranscriptional regulator1e-0653.1
NC_006582:883922:909551909551910216666Bacillus clausii KSM-K16, complete genometranscriptional regulator, GntR family2e-0652.8
NC_014098:2971011:297882229788222979547726Bacillus tusciae DSM 2912 chromosome, complete genometranscriptional regulator, GntR family2e-0652.8
NC_008596:3404832:342173434217343422429696Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, GntR family protein2e-0652.8
NC_002947:4931476:493700649370064937698693Pseudomonas putida KT2440, complete genometranscriptional regulator, GntR family3e-0652.4
NC_010501:4080937:408689040868904087633744Pseudomonas putida W619, complete genometranscriptional regulator, GntR family2e-0652.4
NC_020911:3076791:308053030805303081186657Octadecabacter antarcticus 307, complete genomeGntR family transcriptional regulator2e-0652.4
NC_009937:412302:415716415716416384669Azorhizobium caulinodans ORS 571, complete genomeGntR family transcriptional regulator2e-0652.4
NC_014974:1076565:108378810837881084447660Thermus scotoductus SA-01 chromosome, complete genomeGntR family transcriptional regulator2e-0652.4
NC_019940:2931500:295856629585662959279714Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator2e-0652.4
NC_015458:2441435:246138524613852462053669Pusillimonas sp. T7-7 chromosome, complete genomeGntR family transcriptional regulator3e-0652
NC_013093:2633000:263436726343672635044678Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, GntR family4e-0651.6
NC_009720:583060:586317586317586994678Xanthobacter autotrophicus Py2, complete genomeGntR family transcriptional regulator4e-0651.6
NC_009512:1691930:170640617064061707209804Pseudomonas putida F1, complete genometranscriptional regulator, GntR family4e-0651.6
NC_017986:4374979:438945543894554390258804Pseudomonas putida ND6 chromosome, complete genomeGntR family transcriptional regulator4e-0651.6
NC_008686:1383891:140152714015271402195669Paracoccus denitrificans PD1222 chromosome 1, complete sequencetranscriptional regulator, GntR family5e-0651.2
NC_010170:1324758:133437413343741335066693Bordetella petrii, complete genomeprobable transcriptional regulator7e-0650.8
NC_014258:42262:767237672377397675Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional regulator6e-0650.8
NC_010002:3357752:337233533723353373021687Delftia acidovorans SPH-1, complete genometranscriptional regulator, GntR family6e-0650.8
NC_013939:1625491:163812216381221638790669Deferribacter desulfuricans SSM1, complete genomeGntR family transcriptional regulator6e-0650.8
NC_014364:815346:860465860465861166702Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, GntR family6e-0650.8
NC_007509:832473:839275839275839937663Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, GntR family9e-0650.4
NC_008544:55451:779837798378645663Burkholderia cenocepacia HI2424 chromosome 3, complete sequencetranscriptional regulator, GntR family9e-0650.4
NC_016894:3329562:333153633315363332213678Acetobacterium woodii DSM 1030 chromosome, complete genomeGntR family transcriptional regulator9e-0650.4