Pre_GI: BLASTP Hits

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Query: NC_000909:467607:485578 Methanocaldococcus jannaschii DSM 2661, complete genome

Start: 485578, End: 486003, Length: 426

Host Lineage: Methanocaldococcus jannaschii; Methanocaldococcus; Methanocaldococcaceae; Methanococcales; Euryarchaeota; Archaea

General Information: Methane-producing thermophilic archeon. Isolated from a deep-sea hydrothermal vent in the east Pacific Rise in 1982. This organism is an obligately anaerobic methane-producing archeon and was the first representative of the archaeal domain to be completely sequenced. The cells require a pH of 5.2-7 with 1.0-5.0% NaCl, optimal conditions are pH 6.0 and 3% NaCl. Fixes carbon dioxide to methane as its primary energy-producing biochemical pathway.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013156:728397:748013748013748438426Methanocaldococcus fervens AG86, complete genometranscriptional regulator NikR, CopG family5e-66249
NC_015416:2113949:213483821348382135245408Methanosaeta concilii GP-6 chromosome, complete genomeCopG family transcriptional regulator6e-30129
NC_015680:369777:385309385309385725417Pyrococcus yayanosii CH1 chromosome, complete genometranscription nickel responsive regulator (nikR)2e-27120
NC_000868:1386592:139771213977121398128417Pyrococcus abyssi GE5, complete genomenickel responsive regulator3e-26116
NC_007355:2838952:285914428591442859569426Methanosarcina barkeri str. fusaro chromosome 1, complete sequencetranscriptional regulator, CopG family5e-23106
NC_003552:2133590:215101021510102151447438Methanosarcina acetivorans C2A, complete genometranscriptional regulator, CopG family1e-22105
NC_011146:4070000:407565140756514076070420Geobacter bemidjiensis Bem, complete genomeputative transcriptional regulator, CopG family2e-21101
NC_008212:2978786:299626729962672996806540Haloquadratum walsbyi DSM 16790, complete genometranscription regulator; probably nickel responsive regulator5e-2096.3
NC_019942:987134:103530410353041035708405Aciduliprofundum sp. MAR08-339, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain9e-2095.5
NC_006396:2025500:203044520304452030855411Haloarcula marismortui ATCC 43049 chromosome I, complete sequencetranscriptional regulator CopG family3e-1994
NC_019940:3089884:310346431034643103886423Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator4e-1786.7
NC_019978:315346:320567320567320980414Halobacteroides halobius DSM 5150, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain6e-1579.7
NC_015562:436128:451651451651452046396Methanotorris igneus Kol 5 chromosome, complete genometranscriptional regulator NikR1e-1478.6
NC_004917:340997:341634341634342065432Helicobacter hepaticus ATCC 51449, complete genomenickel responsive regulator2e-1477.8
NC_020388:1582817:158833215883321588721390Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator3e-1477
NC_020388:1428042:143786614378661438255390Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator7e-1475.9
NC_019962:1875952:189258418925841892991408Natrinema pellirubrum DSM 15624, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain1e-1272
NC_013887:1383127:138587513858751386282408Methanocaldococcus sp. FS406-22 chromosome, complete genomeputative transcriptional regulator, CopG family3e-1270.5
NC_008340:2272692:228003322800332280452420Alkalilimnicola ehrlichei MLHE-1, complete genomeputative transcriptional regulator, CopG family5e-1270.1
NC_013959:83992:101591101591102100510Sideroxydans lithotrophicus ES-1 chromosome, complete genometranscriptional regulator NikR, CopG family4e-1270.1
NC_012912:242709:263936263936264355420Dickeya zeae Ech1591, complete genometranscriptional regulator NikR, CopG family9e-1268.9
NC_013887:407771:419348419348419731384Methanocaldococcus sp. FS406-22 chromosome, complete genometranscriptional regulator NikR, CopG family2e-1167.8
NC_013156:381910:396265396265396645381Methanocaldococcus fervens AG86, complete genometranscriptional regulator NikR, CopG family4e-1167
NC_000909:67729:737997379974182384Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein1e-1065.5
NC_008701:168662:184589184589184987399Pyrobaculum islandicum DSM 4184, complete genomeputative transcriptional regulator, CopG family6e-1062.8
NC_016070:167362:187502187502187894393Thermoproteus tenax Kra 1, complete genomeCopG/MetJ family transcriptional regulator6e-1062.8
NC_013508:275081:292753292753293199447Edwardsiella tarda EIB202, complete genomenickel responsive regulator8e-1062.4
NC_007520:1940120:196002519600251960498474Thiomicrospira crunogena XCL-2, complete genomeputative transcriptional regulator, CopG family2e-0961.6
NC_009635:985935:997499997499997906408Methanococcus aeolicus Nankai-3 chromosome, complete genomeCopG family transcriptional regulator2e-0960.8
NC_012779:261438:275788275788276225438Edwardsiella ictaluri 93-146, complete genomenickel-responsive transcriptional regulator NikR, putative3e-0960.5
NC_014820:1087153:110315611031561103551396Cenarchaeum symbiosum A, complete genometranscriptional regulator9e-0958.9
NC_013964:161105:169317169317169745429Haloferax volcanii DS2 plasmid pHV3, complete sequenceRibbon-helix-helix protein, copG family domain protein1e-0858.5
NC_020388:1582817:159309715930971593525429Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator2e-0857.8
NC_019974:2421422:243945524394552439892438Natronococcus occultus SP4, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain2e-0857.4
NC_014729:1908086:191297319129731913380408Halogeometricum borinquense DSM 11551 chromosome, complete genometranscriptional regulator with copg/arc/metj DNA-binding domain and metal-binding domain6e-0856.2
NC_004741:4160500:418449041844904184891402Shigella flexneri 2a str. 2457T, complete genomenickel responsive regulator1e-0755.5
NC_020388:1582817:158544315854431585907465Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator4e-0753.5
NC_006396:1097000:110280211028021103221420Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceputative nickel responsive regulator1e-0652.4
NC_010510:310938:327484327484327945462Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeputative transcriptional regulator, CopG family6e-0649.7